fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G01200 IAA32, MEE10 maternal effect embryo arrest 10, indole-3-acetic acid inducible 32 (.1.2)

>AT2G01200.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PvuII, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
PstI CTGCA|G 17
SacI GAGCT|C 172
StyI C|C[AT][AT]GG 252


Click here to view TAIR data

>AT2G01200.1 length:432
ATGGACCCAA ACACACCTGC AGACTTCTTC AAAGGTTCTT CCAAGTTTCA 
50
TACATATTAC TCACAGACCA AAAAGGGTGG TGGGGTAATC GATCTAGGCC 
100
TCAGCCTTAG GACCATACAA CATGAAACTT ACCTCCCACC GGCGCGAATG 
150
ATAGGTCTCG ACGGGTATGG AGAGCTCATA GACTGGTCGC AGCCCAGCTA 
200
TAACAGCATT ACACAGTTGA AGAGTGAGGA CACTGGACAC CAAAGACTTG 
250
CCCAAGGATA TTACAATAAT GAAGGAGAGA GCAGAGGAAA ATATGCTTAC 
300
GTAAAGGTAA ATCTGGATGG CCTAGTGGTA GGGCGCAAGG TTTGCCTTGT 
350
TGATCAAGGA GCTTACGCAA CTCTTGCTCT TCAGCTCAAT GATATGTTTG 
400
ACCGTGTCGG GATTGAGGTT GTTCCAGACT GA
450

>AT2G01200.1 longest ORF length:143
MDPNTPADFF KGSSKFHTYY SQTKKGGGVI DLGLSLRTIQ HETYLPPARM 
50
IGLDGYGELI DWSQPSYNSI TQLKSEDTGH QRLAQGYYNN EGESRGKYAY 
100
VKVNLDGLVV GRKVCLVDQG AYATLALQLN DMFDRVGIEV VPD
150