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| Locus | Common name | Short description |
| AT2G01940 | SGR5, ATIDD15 | SHOOT GRAVITROPISM 5, ARABIDOPSIS THALIANA INDETERMINATE\(ID\)-DOMAIN 15, C2H2-like zinc finger protein (.1.2.3) |
>AT2G01940.3 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HpaI, NheI, NotI, PacI, PvuII, SacI, SalI, SmaI, SpeI
| Name | Recognition sequence | Cut positions |
| BglII | A|GATCT | 227, 396 |
| HindIII | A|AGCTT | 298, 1043 |
| KpnI | GGTAC|C | 151 |
| NcoI | C|CATGG | 292 |
| NdeI | CA|TATG | 219 |
| PstI | CTGCA|G | 146 |
| StyI | C|C[AT][AT]GG | 237, 292 |
| XbaI | T|CTAGA | 670, 750 |
| XhoI | C|TCGAG | 1147 |
Click here to view TAIR data
>AT2G01940.3 length:1341
ATGAGAACAG ATCAAGTGAT GTTGTCCAAC AAGAACACAA ACACATGTTG | 50 |
TGTGGTTTCT TCTTCTTCTT CTGATCCTTT CCTCTCCTCT TCAGAAAATG | 100 |
GGGTCACCAC CACAAACACA TCCACTCAGA AGAGGAAAAG AAGACCTGCA | 150 |
GGTACCCCAG ATCCAGATGC AGAAGTTGTG TCTTTATCAC CAAGAACTCT | 200 |
TCTTGAATCA GACAGATACA TATGTGAGAT CTGTAACCAA GGGTTTCAAA | 250 |
GAGACCAGAA TCTCCAGATG CATAGAAGAC GTCACAAAGT TCCATGGAAG | 300 |
CTTCTTAAAA GAGACAACAA CATAGAGGTG AAGAAACGAG TCTATGTTTG | 350 |
CCCTGAACCC ACTTGCCTTC ACCATAATCC TTGTCATGCT CTGGGAGATC | 400 |
TTGTCGGCAT CAAAAAACAT TTCAGAAGAA AACATAGTAA CCATAAGCAA | 450 |
TGGGTTTGTG AGAGATGCTC TAAAGGTTAT GCTGTTCAAT CTGATTACAA | 500 |
AGCTCATCTC AAAACTTGTG GTACTAGAGG ACATTCTTGT GACTGTGGTT | 550 |
TCTTTTCTTC TTTTAGGGTG GAGAGTTTTA TTGAACATCA AGATAATTGT | 600 |
TCCGCACGGA GAGTTCACCG TGAACCGCCT CGACCACCAC AAACCGCGGT | 650 |
AACAGTCCCG GCATGCTCTT CTAGAACCGC CTCAACCGTC AGCACTCCGT | 700 |
CTAGTGAAAC CAATTACGGC GGTACAGTTG CGGTTACGAC TCCTCAACCT | 750 |
CTAGAAGGCC GTCCAATTCA TCAGAGAATC TCATCTTCAA TTCTCACCAA | 800 |
CTCATCAAAC AATCTCAACC TCGAACTCCA ACTTCTTCCA TTATCGTCGA | 850 |
ATCAAAACCC TAATCAAGAA AACCAACAAC AAAAAGTTAA AGAACCATCT | 900 |
CATCATCATA ATCATAATCA TGATACCACA AACTTAAACC TCTCCATTGC | 950 |
ACCATCATCA TCATATCAAC ATTACAACAA CTTTGATCGT ATAAAAGAGA | 1000 |
TTATGGCGAG CGAGCAAATT ATGAAGATAG CGATGAAGGA GAAAGCTTAC | 1050 |
GCTGAGGAAG CTAAAAGAGA AGCCAAGAGG CAACGAGAGA TAGCGGAAAA | 1100 |
CGAGTTTGCA AATGCCAAAA AGATTAGGCA AAAAGCACAA GCTGAACTCG | 1150 |
AGAGAGCTAA GTTTTTAAAG GAACAATCTA TGAAGAAGAT AAGTTCAACG | 1200 |
ATCATGCAGG TCACTTGTCA AACATGTAAA GGACAGTTTC AAGCAGTTGC | 1250 |
GGTTCCGGCG GCTACGGCTG ATGAGACGTC TCTTGTCGTG AGTTACATGT | 1300 |
CGTCAGCGAA TACTGACGGA GAGTTGGAAA ATGGTTTTTA A | 1350 |
>AT2G01940.3 longest ORF length:446
MRTDQVMLSN KNTNTCCVVS SSSSDPFLSS SENGVTTTNT STQKRKRRPA | 50 |
GTPDPDAEVV SLSPRTLLES DRYICEICNQ GFQRDQNLQM HRRRHKVPWK | 100 |
LLKRDNNIEV KKRVYVCPEP TCLHHNPCHA LGDLVGIKKH FRRKHSNHKQ | 150 |
WVCERCSKGY AVQSDYKAHL KTCGTRGHSC DCGFFSSFRV ESFIEHQDNC | 200 |
SARRVHREPP RPPQTAVTVP ACSSRTASTV STPSSETNYG GTVAVTTPQP | 250 |
LEGRPIHQRI SSSILTNSSN NLNLELQLLP LSSNQNPNQE NQQQKVKEPS | 300 |
HHHNHNHDTT NLNLSIAPSS SYQHYNNFDR IKEIMASEQI MKIAMKEKAY | 350 |
AEEAKREAKR QREIAENEFA NAKKIRQKAQ AELERAKFLK EQSMKKISST | 400 |
IMQVTCQTCK GQFQAVAVPA ATADETSLVV SYMSSANTDG ELENGF | 450 |