fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G02060 Homeodomain-like superfamily protein (.1)

>AT2G02060.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
HindIII A|AGCTT 33
StyI C|C[AT][AT]GG 545


Click here to view TAIR data

>AT2G02060.1 length:771
ATGGGTAAGT CTAGTGGTAG AAATGGTAAC GGAAGCTTTA ACGGCAATAA 
50
ATTTCACGGA GTTAGACCTT ACGTACGGTC TCCAGTTCCA CGGCTTAGAT 
100
GGACGCCGGA TCTTCACCGT TGTTTCGTTC ACGCCGTCGA GATTCTCGGT 
150
GGTCAACACC GAGCAACACC AAAACTTGTT CTTAAGATGA TGGATGTGAA 
200
GGGACTTACC ATTTCACATG TCAAAAGCCA CCTTCAGATG TATAGAGGAG 
250
GTTCAAAGCT CACTTTGGAG AAACCAGAAG AAAGCTCATC ATCTTCAATA 
300
AGAAGAAGAC AAGACAGTGA AGAAGATTAT TATCTTCATG ACAACTTGTC 
350
TTTACACACA AGGAATGATT GTCTTTTGGG TTTTCACTCT TTTCCTCTTT 
400
CTTCACATTC TTCATTTAGA GGAGGAGGAG GAGGAAGAAC AAAAGAGCAG 
450
CAGACTTCAG AGTCTGGTGG TTATGATGAT GATGCTGACT TTCTTCACAT 
500
CAAGAAGATG AACGATACGA CGACGTTTTT GTCACATCAT TTCCCCAAGG 
550
GAACAGAGGA GTGGCGGGAA CAAGAACACG AAGAAGAAGA AGAAGATTTG 
600
TCGTTGTCTC TGTCGTTAAA TCATCATCAT TGGAGAAGCA ATGGATCATC 
650
GGTGGTGAGC GAAACGAGTG AAGCAGCAGT CTCGACTTGT TCAGCACCAT 
700
TCGTATCCAA AGATTGCTTT GGTTCTTCAA AGATTGATCT TAATCTGTCA 
750
ATTTCTCTCC TCGGTAGCTA A
800

>AT2G02060.1 longest ORF length:256
MGKSSGRNGN GSFNGNKFHG VRPYVRSPVP RLRWTPDLHR CFVHAVEILG 
50
GQHRATPKLV LKMMDVKGLT ISHVKSHLQM YRGGSKLTLE KPEESSSSSI 
100
RRRQDSEEDY YLHDNLSLHT RNDCLLGFHS FPLSSHSSFR GGGGGRTKEQ 
150
QTSESGGYDD DADFLHIKKM NDTTTFLSHH FPKGTEEWRE QEHEEEEEDL 
200
SLSLSLNHHH WRSNGSSVVS ETSEAAVSTC SAPFVSKDCF GSSKIDLNLS 
250
ISLLGS
300