fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G02820 ATMYB88 myb domain protein 88 (.1.2)

>AT2G02820.2 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HindIII, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 942, 1300
HpaI GTT|AAC 436
SmaI CCC|GGG 1251


Click here to view TAIR data

>AT2G02820.2 length:1455
ATGGAAGAGA CAACTAAGCA GAACAACATG AAGAAGAAGA AGAAGATTCT 
50
TCTTCATTCC GATGATTCCA AGAAGAAGGA GCGTCATATT GTTACTTGGT 
100
CTCCTGAGGA GGATGATATA CTAAGGAAGC AAATCAGTTT ACAGGGAACT 
150
GAAAATTGGG CGATCATTGC ATCCAAGTTT AATGATAAGA GCACAAGGCA 
200
GTGTAGAAGA AGATGGTATA CATACTTGAA CTCTGATTTC AAGAGAGGAG 
250
GTTGGTCCCC TGAAGAAGAT ACACTTTTGT GTGAGGCACA GAGATTGTTT 
300
GGGAATAGGT GGACTGAGAT AGCAAAAGTG GTCTCAGGAA GAACGGATAA 
350
TGCTGTGAAG AACAGGTTTA CTACACTGTG CAAGAAGAGG GCTAAGCATG 
400
AAGCTATGGC GAAAGAGAAC AGGATTGCTT GTTGTGTTAA CTCAGACAAC 
450
AAGAGACTGT TGTTCCCAGA TGGTATTAGT ACACCGCTAA AAGCCGAAAG 
500
TGAATCTCCT CTTACTAAGA AAATGAGGAG AAGTCATATT CCAAATCTTA 
550
CAGAGATTAA GAGCTATGGG GATAGATCAC ATATAAAGGT TGAATCGACT 
600
ATGAATCAAC AGAGAAGACA TCCATTTTCT GTAGTAGCCC ACAATGCCAC 
650
AAGTAGTGAT GGTACAGAGG AGCAGAAACA AATAGGCAAT GTGAAAGAGA 
700
GTGACGGTGA GGATAAAAGT AACCAAGAGG TGTTTCTTAA GAAGGATGAT 
750
TCAAAGGTGA CAGCTTTGAT GCAACAAGCT GAACTTCTCA GTTCATTGGC 
800
CCAGAAAGTT AATGCAGACA ACACAGACCA AAGCATGGAG AATGCCTGGA 
850
AGGTTCTACA GGATTTCTTG AATAAGAGCA AAGAAAATGA TCTATTTAGA 
900
TATGGAATCC CAGATATTGA TTTCCAACTC GATGAATTTA AAGATCTTGT 
950
TGAGGACTTG AGGAGTAGTA ATGAAGATAG TCAATCATCT TGGAGGCAAC 
1000
CTGATCTCCA TGATTCACCA GCAAGCTCTG AATATAGCTC AGGATCAGGA 
1050
TCAGGATCAA CCATAATGAC GCATCCTTCT GGTGATAAAA CCCAACAACT 
1100
TATGTCTGAT ACTCAGACAA CATCACATCA GCAAAATGGT GGGGAGTTAC 
1150
TACAAGATAA TGGGATTGTG TCTGATGCAA CTGTGGAACA AGTGGGTTTA 
1200
CTCTCAACTG GTCATGATGT GTTAAAGAAC TCTAATGAGA CTGTGCCTAT 
1250
CCCGGGTGAA GAAGAGTTTA ACTCGCCTGT TCAAGTCACT CCATTGTTCA 
1300
GATCTCTAGC AGCAGGCATC CCAAGCCCAC AATTCTCTGA AAGTGAGAGG 
1350
AACTTTCTGC TAAAAACACT TGGTGTCGAG TCCCCATCTC CATATCCAAG 
1400
TGCTAATCCT TCACAACCAC CTCCTTGCAA AAGAGTCCTT CTCGATAGCT 
1450
TGTAA
1500

>AT2G02820.2 longest ORF length:484
MEETTKQNNM KKKKKILLHS DDSKKKERHI VTWSPEEDDI LRKQISLQGT 
50
ENWAIIASKF NDKSTRQCRR RWYTYLNSDF KRGGWSPEED TLLCEAQRLF 
100
GNRWTEIAKV VSGRTDNAVK NRFTTLCKKR AKHEAMAKEN RIACCVNSDN 
150
KRLLFPDGIS TPLKAESESP LTKKMRRSHI PNLTEIKSYG DRSHIKVEST 
200
MNQQRRHPFS VVAHNATSSD GTEEQKQIGN VKESDGEDKS NQEVFLKKDD 
250
SKVTALMQQA ELLSSLAQKV NADNTDQSME NAWKVLQDFL NKSKENDLFR 
300
YGIPDIDFQL DEFKDLVEDL RSSNEDSQSS WRQPDLHDSP ASSEYSSGSG 
350
SGSTIMTHPS GDKTQQLMSD TQTTSHQQNG GELLQDNGIV SDATVEQVGL 
400
LSTGHDVLKN SNETVPIPGE EEFNSPVQVT PLFRSLAAGI PSPQFSESER 
450
NFLLKTLGVE SPSPYPSANP SQPPPCKRVL LDSL
500