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| Locus | Common name | Short description |
| AT2G05160 | CCCH-type zinc fingerfamily protein with RNA-binding domain (.1) |
>AT2G05160.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, KpnI, NcoI, NheI, NotI, PacI, PstI, PvuII, SmaI, SpeI, StyI, XhoI
| Name | Recognition sequence | Cut positions |
| BamHI | G|GATCC | 369 |
| BglII | A|GATCT | 71 |
| EcoRI | G|AATTC | 192, 315, 388 |
| EcoRV | GAT|ATC | 755 |
| HindIII | A|AGCTT | 805 |
| HpaI | GTT|AAC | 1398 |
| NdeI | CA|TATG | 1019 |
| SacI | GAGCT|C | 683, 1293 |
| SalI | G|TCGAC | 841 |
| XbaI | T|CTAGA | 946 |
Click here to view TAIR data
>AT2G05160.1 length:1611
ATGAATTTCA CAGAATCAAT GAACGTTGTG CACGCCAGAA TCCAACAACT | 50 |
TGAACCAGAG AATGCAGCAA AGATCTTTGG TTATCTCTTG TTGATGCAAG | 100 |
AAAATGGCAA CCGCGACATG ATCCGTCTCG CGTTCTGTCC TGATTCTGTT | 150 |
ATGTGTTCTG TCATCAATTG CGTTAAATAC GAGTTAGCTA GGAATTCTCA | 200 |
TCATTACCAC AGCCCTCCTT CTGATCACAT TCCTACTCCC AAATTTGGAT | 250 |
CATTCACCGG TTCATCGCCT CTTTCGGTTT CGGTTTCTCC TCCCATGAAA | 300 |
ACCGGTTTTT GGGAGAATTC AACCGAGATG GATACCTTGC AGAACAATCT | 350 |
TCAGTTCTTG AATTTTGAGG ATCCTTTGAC CAGCCCTGAA TTCTCTAACG | 400 |
GGTTCTTCTC TCAAGAACGT CAATGTTTGC CTTTGCGAAC TAGCCGAAGA | 450 |
TCCCCGAGTT TACCCGAGTT CCCGGTAAAA ATCTGCCATT ACTTCAACAA | 500 |
AGGGTTCTGC AAACACGGCA ACAACTGTAG GTACTTCCAC GGGCAGATTA | 550 |
TACCGGAGAG GGAGAGTTTT GCTCAGATGT TTAATCCAAA CAACAACCTA | 600 |
AGTGACGAAG AGCATGTTGT TTCCCCTGTA TCTCTTGAGA AGCTAGAAGG | 650 |
TGAGATCATT GAGTTACTCA AGTTAAGAAG AGGAGCTCCA ATCTCCATAG | 700 |
CTTCATTGCC AATGATGTAC TACGAAAAAT ACGGTAGGAC TCTTCAAGCT | 750 |
GAAGGATATC TCACTGAGTC ACAAAGACAT GGCAAAGCTG GCTATAGTCT | 800 |
CACCAAGCTT CTTGCTCGCT TGAAGAACAC GATTCGCCTC GTCGACAGGC | 850 |
CTCATGGGCA ACATTCAGTT ATATTAGCAG AGGATGCATC AAAGTTTGTG | 900 |
GAATACACTG GAGAGAGAAA TGAACATGGA GCAATCCTTG CTGGTTCTAG | 950 |
ACAGATTTAC TTAACGTTTC CGGCAGAGAG TAGTTTCACT GAACATGATG | 1000 |
TCTCAATCTA CTTCACCTCA TATGGACATG TGGAAGATGT GAGGATTCCT | 1050 |
TGCCAGCAGA AAAGAATGTA TGGATTTGTA ACATTTGCTT CCTCAGAAAC | 1100 |
AGTTAAACAC ATTCTTGCTA AAGGCAATCC TCATTTCATT TGCAATGCAC | 1150 |
GTGTTCTAGT CAAGCCTTAC CGGGAAAAAT CACGCTCTAG TCGATACCTC | 1200 |
GACAATTACA AGCCTCTACA CGGCATGCGA TATGGCTCTA AATTTATTGA | 1250 |
GAGAGACATA GAGATGAACA CATTGCCACC GCGGGTTAGT GAGAGCTCAA | 1300 |
GAATGAGGAA GCCATTTCTT AGTGAGCCTG AACAATCAGT TTCTAAGTCC | 1350 |
TTACCTACTA ATTACTCCTA CCTCGGCTTC TCCTCGGATG ACTTCAAGTT | 1400 |
AACATCAAAT GCGGAGCAAG AGGAACAAGC AGAACGGTTG AGCTACCTAC | 1450 |
TGGACTATTT GAACACGGAA GATAATGTCA TGAACATAAC CACTAACTAC | 1500 |
AGAGACAATG ATCGGAGAAC TCATTGTGAA TCGTTGGACA GTCAAGTCCT | 1550 |
GAATCTACCC GAGAGTCCGT TTTCTTCCCT TTCGGGGAAG GAGATTTCAA | 1600 |
CGGTTACATA G | 1650 |
>AT2G05160.1 longest ORF length:536
MNFTESMNVV HARIQQLEPE NAAKIFGYLL LMQENGNRDM IRLAFCPDSV | 50 |
MCSVINCVKY ELARNSHHYH SPPSDHIPTP KFGSFTGSSP LSVSVSPPMK | 100 |
TGFWENSTEM DTLQNNLQFL NFEDPLTSPE FSNGFFSQER QCLPLRTSRR | 150 |
SPSLPEFPVK ICHYFNKGFC KHGNNCRYFH GQIIPERESF AQMFNPNNNL | 200 |
SDEEHVVSPV SLEKLEGEII ELLKLRRGAP ISIASLPMMY YEKYGRTLQA | 250 |
EGYLTESQRH GKAGYSLTKL LARLKNTIRL VDRPHGQHSV ILAEDASKFV | 300 |
EYTGERNEHG AILAGSRQIY LTFPAESSFT EHDVSIYFTS YGHVEDVRIP | 350 |
CQQKRMYGFV TFASSETVKH ILAKGNPHFI CNARVLVKPY REKSRSSRYL | 400 |
DNYKPLHGMR YGSKFIERDI EMNTLPPRVS ESSRMRKPFL SEPEQSVSKS | 450 |
LPTNYSYLGF SSDDFKLTSN AEQEEQAERL SYLLDYLNTE DNVMNITTNY | 500 |
RDNDRRTHCE SLDSQVLNLP ESPFSSLSGK EISTVT | 550 |