fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G13960 Homeodomain-like superfamily protein (.1.2)

>AT2G13960.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, XbaI, XhoI
Name Recognition sequence Cut positions
SacI GAGCT|C 3
SpeI A|CTAGT 199
StyI C|C[AT][AT]GG 385


Click here to view TAIR data

>AT2G13960.1 length:453
ATGAGCTCAA GTTCGAATCC ACCGGTTTGT TCACCGGAAA AGGAGGAAAG 
50
AAGTGAAATG AAGATTGAGA TTCAATGTAT GGAGAATAAG CAACCATTAG 
100
CTGCTTCTTG CTCCTCTGCA TCCGAAGGCA GTGGCTGTTT CTTCCTCAAG 
150
TCACCTGAAA TCGCAACTCC TGCCACAGTA TCTTCATTTC CTCGGAGGAC 
200
TAGTGGACCT ATGAGACGAG CAAAAGGTGG TTGGACTCCA GAGGAGGATG 
250
AGACACTTAG ACGAGCAGTT GAAAAGTATA AGGGGAAGAG GTGGAAGAAA 
300
ATAGCGGAAT TTTTCCCAGA GAGAACACAA GTCCAATGCT TGCACAGGTG 
350
GCAGAAAGTT CTTAATCCAG AGCTTGTTAA AGGACCTTGG ACTCAAGAGG 
400
TTCTCTTATC ATTTTCATGT TCTGAAACTT TTTTTGGTTT TCATTTTACG 
450
TAA
500

>AT2G13960.1 longest ORF length:150
MSSSSNPPVC SPEKEERSEM KIEIQCMENK QPLAASCSSA SEGSGCFFLK 
50
SPEIATPATV SSFPRRTSGP MRRAKGGWTP EEDETLRRAV EKYKGKRWKK 
100
IAEFFPERTQ VQCLHRWQKV LNPELVKGPW TQEVLLSFSC SETFFGFHFT 
150