fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G15740 C2H2-like zinc finger protein (.1)

>AT2G15740.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRV, HindIII, HpaI, KpnI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI
Name Recognition sequence Cut positions
EcoRI G|AATTC 833
NcoI C|CATGG 126
NdeI CA|TATG 226, 710, 784
StyI C|C[AT][AT]GG 126
XhoI C|TCGAG 293


Click here to view TAIR data

>AT2G15740.1 length:990
ATGTCTTCTA TGCCAAATAA GTTCAATCCT CACTGTGATG ATAACAATCG 
50
TGGTTTTTCC TCCATCCAAA TGAATCAAAA TTCTCAAATG GTTCATTCGA 
100
GGTTCATTAC TTCGGATCAC ACAAACCATG GTGATCTGTT TTCATCATCT 
150
CCTTCTTTTT CTTGTTTTCA TAATTCACAT GCCTCTTCAT CTTCATTTGG 
200
ATTCCAAAAT TCACATGTGG AAAATCATAT GATGAAGAGA AACATAATTT 
250
CTGATGACAA TTATTTTTCT ATCACAAACA ATCCTCATTT TACTCGAGTT 
300
TCTTTCACAC AAACCATTAC AAACAAATTT ACAGCCATTG TTCCTACTAA 
350
TACACTTGAC GCTGTACAAT ATGATGCTCA ACGTGTCAAA CGTGCCATGA 
400
ATCCCAAAAC CAATATTTGG AATCCTATAT TTTCTCCTCC AAATACTTTT 
450
GATAAACAAT GCGAATTTTT GAATCCTAAA CCTCTTAATG TCATTTTTCC 
500
GAGTCAAAAT TCTGCATATC CTCAACATTT AGACATGTTT TCCTTGTCAT 
550
CAAAGCACAA TCATGATCAA CGTGTTCTCC AAGATGGTCG TTCTATGAAG 
600
AAAATCTTGA AACCAACCAT ATTTTTTGAA GCAACTACTG ATTACATTGA 
650
GTCTCAAGAA AACGAGAAAA GTAACAATGA TCACAATGAT GGTAGGACAC 
700
ATAGTCTACC ATATGAAAAA TATGGTCCAT ATACATGTCC CAAGTGCAAT 
750
GGCGTCTTTA ATACTTCTCA AAAATTTGCT GCACATATGT CATCTCACTA 
800
CAAGAATGAA ACAAGCGAAG AAAGAGAACA GAGAATTCGT GCAAAGAACA 
850
AAAGAAAATT TTGTAAACTA AATCGTGAAA TTAATGGTGA GCCTCAAAAG 
900
ACCAAACAAG AGGATGTGGC CAACAACAGT GAAAAAAGTG ACGATAAAAC 
950
TTTCCAACAT CTTGTGGTCG TAAAAGAAGA GCTTGTTTAG 
1000

>AT2G15740.1 longest ORF length:329
MSSMPNKFNP HCDDNNRGFS SIQMNQNSQM VHSRFITSDH TNHGDLFSSS 
50
PSFSCFHNSH ASSSSFGFQN SHVENHMMKR NIISDDNYFS ITNNPHFTRV 
100
SFTQTITNKF TAIVPTNTLD AVQYDAQRVK RAMNPKTNIW NPIFSPPNTF 
150
DKQCEFLNPK PLNVIFPSQN SAYPQHLDMF SLSSKHNHDQ RVLQDGRSMK 
200
KILKPTIFFE ATTDYIESQE NEKSNNDHND GRTHSLPYEK YGPYTCPKCN 
250
GVFNTSQKFA AHMSSHYKNE TSEEREQRIR AKNKRKFCKL NREINGEPQK 
300
TKQEDVANNS EKSDDKTFQH LVVVKEELV
350