fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G16210 Transcriptional factor B3 family protein (.1.2)

>AT2G16210.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BglII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 647
EcoRI G|AATTC 654
EcoRV GAT|ATC 629
HindIII A|AGCTT 51, 126
PstI CTGCA|G 470, 599
PvuII CAG|CTG 473
SacI GAGCT|C 142
StyI C|C[AT][AT]GG 501


Click here to view TAIR data

>AT2G16210.1 length:876
ATGGCTACGA ACGCTGGTTA TCTTCGGTGC AAAGAAGAGC GCAAGAATGA 
50
AAGCTTCTTC AAGGTTGTTC AGAGTATAAA TGTTTCTTCA GAAAACAAGA 
100
GAGCACTTCC ACATGACTTT TCGAGAAGCT TCACCGACAA AGAGCTCTCA 
150
CGTAAGATGA AGATAAGAGC GCAATGGGGA AACTCTTGGG AAGTAGGAAT 
200
CTCTAAAAAC CCTAGATTTT ACTTCATGGA GAAGTCTGGC TGGGAGAAGT 
250
TTGTGAGGGA CAATGCTTTG GGAAACAGTG AGTTACTTAC CTTCACTCAC 
300
AAAGGGAAAA TGCACTTTAC CGTGAACATC TTTAAGCTAG ACGGGAAAGA 
350
GATGATGCAA CCTCCACAAT CCAGATCCTT CTTTGCTTCT TCAAGTCGTA 
400
TCAAAACAGA ACAAGAGGAA AATGACATTA AGGAAGAGGT AGTGGTATCT 
450
TCTAACCGTG GCCAGACAAC TGCAGCTGAA TCTAAAGGAA GAAAGCTCAA 
500
CCTTGGGAAG AGGGCAGCTA AGGAATCCCA AAGTTCTAAA AGGACCGAGA 
550
AAGTGGTTAG AGCCCGAAGT GATTACGCTG GTGCCTCTTC ATCTACTGCT 
600
GCAGCATTCA CCATCTTGTT CAAGCAAGGA TATCTCGTAT TCCTGAGGAT 
650
CCCGAATTCT GTATCGAAGG ATCAAGTGCC GGATGAGAAA ACAGTATTCA 
700
AGATCCATCA CCCAAATGGG AAGAAATCAT GGAATGTGGT TTATCTGGAG 
750
AGGTTTGGAG CTTTCTCTGG TGGATGGCGT CGTGTGGTTA AAGAGTATCC 
800
CCTTGCTGTT GGTGATACCT GCAAATTCAC ATTCATCAAA CCAAAGGAGC 
850
TACTTCTAGT TGTCTCCAAA CCCTAA
900

>AT2G16210.1 longest ORF length:291
MATNAGYLRC KEERKNESFF KVVQSINVSS ENKRALPHDF SRSFTDKELS 
50
RKMKIRAQWG NSWEVGISKN PRFYFMEKSG WEKFVRDNAL GNSELLTFTH 
100
KGKMHFTVNI FKLDGKEMMQ PPQSRSFFAS SSRIKTEQEE NDIKEEVVVS 
150
SNRGQTTAAE SKGRKLNLGK RAAKESQSSK RTEKVVRARS DYAGASSSTA 
200
AAFTILFKQG YLVFLRIPNS VSKDQVPDEK TVFKIHHPNG KKSWNVVYLE 
250
RFGAFSGGWR RVVKEYPLAV GDTCKFTFIK PKELLLVVSK P
300