Locus |
Common name |
Short description |
AT2G16400 |
BLH7 |
BEL1-like homeodomain 7 (.1) |
>AT2G16400.1 CDS map
>>Show genomic map

Uncut enzymes: AatII, Acc65I, AccI, AciI, AfeI, AflIII, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AvaII, AvrII, BaeI, BamHI, BanI, BanII, BbsI, BbvI, BcgI, BciVI, BglI, BglII, BlpI, BmrI, BpmI, BsaAI, BsaBI, BsaI, BsaXI, BseRI, BsgI, BsiEI, BsiHKAI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, Bsp1286I, BspMI, BspT107I(HgiCI), BsrBI, BssHII, BstBI, BstXI, BstYI, BstZ17I, Bsu36I, BtrI, BtsI, DraI, DraIII, DrdI, EagI, EarI, EciI, EcoNI, EcoO109I, FauI, FokI, FseI, FspI, HaeII, HgaI, HincII, HindIII, HpaI, HphI, Hpy99I, I-CeuI, I-SceI, KasI, KpnI, MboII, MluI, MlyI, MnlI, NaeI, , NarI, NdeI, NgoMIV, NheI, NotI, NruI, PI-PspI, PI-SceI(VDE), PacI, PciI, PflFI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspOMI, PstI, PvuI, PvuII, RsrII, SacI, SacII, SalI, SapI, SbfI, SfaNI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SphI, SspI, StuI, SwaI, Tth111I, XbaI, XmaI
Name |
Recognition sequence |
Cut positions |
AccII(FnuDII)
| CG|CG |
866, 1014 |
AccIII(BspMII)
| T|CCGGA |
703 |
AclI
| AA|CGTT |
1284 |
AflII
| C|TTAAG |
687 |
AgeI
| A|CCGGT |
1229 |
AluI
| AG|CT |
263, 364, 375, 406, 1137, 1441 |
ApoI
| Pu|AATTPy |
49, 81, 1063, 1299 |
AseI
| AT|TAAT |
442 |
AvaI
| C|PyCGPuG |
669, 1362 |
BalI
| TGG|CCA |
2 |
BbvCI
| CC|TCAGC |
262 |
BclI
| T|GATCA |
795 |
BfaI
| C|TAG |
102, 963, 1152 |
BsaHI
| GPu|CGPyC |
251 |
BsaJI
| C|CNNGG |
57, 159, 984, 1218 |
BsaWI
| [AT]|CCGG[AT] |
703, 1229, 1330 |
BslI
| CCNNNNN|NNGG |
670, 867, 989, 1165, 1329 |
BsoBI
| C|PyCGPuG |
669, 1362 |
BspDI
| AT|CGAT |
537 |
BspEI
| T|CCGGA |
703 |
BspHI
| T|CATGA |
1235 |
BsrDI
| GCAATGNN| |
69 |
BsrFI
| Pu|CCGGPy |
1229 |
BsrGI
| T|GTACA |
1052 |
BsrI
| ACTGGN| |
19, 1001 |
BssKI
| |CCNGG |
57, 239, 989, 1176 |
BssSI
| C|TCGTG |
1310 |
BstAPI
| GCANNNN|NTGC |
509 |
BstEII
| G|GTNACC |
1226 |
BstF5I
| GGATGNN| |
623, 694, 748, 1275 |
BstNI
| CC|[AT]GG |
57, 989, 1176 |
BstUI
| CG|CG |
866, 1014 |
BtgI
| C|CPuPyGG |
1218 |
Cac8I
| GCN|NGC |
266, 960, 1186 |
Cfr10I
| [AG]|CCGG[TC] |
1229 |
ClaI
| AT|CGAT |
537 |
DdeI
| C|TNAG |
261, 1147 |
DpnI
| GA-CH3|TC |
209, 750, 794, 952, 1088, 1370 |
DpnII
| |GATC |
209, 750, 794, 952, 1088, 1370 |
EaeI
| Py|GGCCPu |
2 |
EcoRI
| G|AATTC |
1063, 1299 |
EcoRV
| GAT|ATC |
699 |
Fnu4HI
| GC|NGC |
366, 630, 824, 857, 1139 |
HaeIII
| GG|CC |
1, 257, 858, 986, 1213 |
HhaI
| GCG|C |
653, 1013 |
HinP1I
| G|CGC |
653, 1013 |
HinfI
| G|ANTC |
108, 140, 185, 192, 230, 461, 879, 942, 1130, 1149, 1292 |
HpaII
| C|CGG |
239, 618, 702, 1228, 1329 |
Hpy188I
| TCN|GA |
467, 581, 659, 753, 945, 1104, 1295, 1302 |
HpyCH4III
| ACN|GT |
390, 1209, 1376 |
HpyCH4IV
| A|CGT |
1283 |
HpyCH4V
| TG|CA |
307, 510, 585, 822, 840, 1072, 1077, 1140, 1428 |
MboI
| |GATC |
209, 750, 794, 952, 1088, 1370 |
MfeI
| C|AATTG |
1423 |
MscI
| TGG|CCA |
2 |
MseI
| T|TAA |
393, 399, 441, 686, 782, 1280, 1382 |
MslI
| CAPyNN|NNPuTG |
1223, 1240 |
MspA1I
| C[AC]G|C[GT]G |
826 |
MspI
| C|CGG |
239, 618, 702, 1228, 1329 |
MwoI
| GCNNNNN|NNGC |
422, 509, 914 |
N.BstNBI
| GAGTCNNNN|N |
1154 |
NciI
| CC|[CG]GG |
239 |
NcoI
| C|CATGG |
1218 |
NlaIII
| CATG| |
955, 1169, 1195, 1217, 1234, 1249, 1430 |
NlaIV
| GGN|NCC |
1366 |
NsiI
| ATGCA|T |
1073 |
NspI
| PuCATG|Py |
1170 |
PaeR7I
| C|TCGAG |
669 |
PspGI
| |CC[AT]GG |
57, 989, 1176 |
RsaI
| GT|AC |
1051, 1172, 1378 |
Sau3AI
| |GATC |
209, 750, 794, 952, 1088, 1370 |
Sau96I
| G|GNCC |
1214 |
ScaI
| AGT|ACT |
1379 |
ScrFI
| CC|NGG |
57, 239, 989, 1176 |
SexAI
| A|CC[AT]GGT |
1177 |
SfcI
| C|TPuPyAG |
1375 |
SmlI
| C|TPyPuAG |
24, 371, 491, 669, 687 |
StyI
| C|C[AT][AT]GG |
159, 1218 |
Taqƒ¿I
| T|CGA |
281, 334, 524, 536, 606, 668, 995 |
TfiI
| G|A[AT]TC |
108, 140, 185, 192, 230, 461, 879, 942, 1130, 1292 |
TliI
| C|TCGAG |
669 |
TseI
| G|C[AT]GC |
366, 630, 824, 1139 |
Tsp45I
| |GT[CG]AC |
125, 1225, 1242 |
Tsp509I
| |AATT |
48, 80, 507, 560, 1062, 1298, 1422 |
TspRI
| NNCA[CG]TGNN| |
1212 |
XcmI
| CCANNNNN|NNNNTGG |
1410 |
XhoI
| C|TCGAG |
669 |
XmnI
| GAANN|NNTTC |
235, 1003 |
Click here to view TAIR data
>AT2G16400.1 length:1449
ATGGCCACTT ATTACAAAAC TGGCTCAAGT GAGATTTATT CCAGACCAGA | 50 |
ATTTGTCCCT GGAAACGCAA TGAACTACAC AAATTCTTTC ACAGAGACAT | 100 |
TTCCTAGAGA TTCAACTAAT AATGTGTCAC CTTCAAAAGA GATTCAAGTG | 150 |
TTGTCAAGCC TTGGTGGAGT TTCACAAATG GTTGAGATTC AAGATTCTGG | 200 |
TTCTTGGAGA GATCAAGAAG ACAATGACAG GAATCGCTTC CCGGTGATGA | 250 |
GGCGTCTTGG CCTCAGCTCG CAGATTGAGA CATCGAGAGG CAATAATAAC | 300 |
AATGAGTATG CAACACAGGT TGTTTCGGGA TTTACTCGAA CCATTCACAA | 350 |
CTCAAAGTAT CTCAAAGCTG CTCAAGAGCT TCTTGATGAA ACTGTTAATG | 400 |
TTAAGAAAGC TCTAAAGCAG TTTCAGCCAG AGGGAGATAA GATTAATGAA | 450 |
GTGAAAGAGA AGAATCTTCA GACGAATACT GCTGAAATCC CTCAAGCAGA | 500 |
GAGGCAAGAA TTGCAGAGCA AGTTGTCGAA ACTTTTATCG ATATTAGACG | 550 |
AGGTGGATAG AAATTACAAG CAGTATTACC ATCAGATGCA GATAGTCGTG | 600 |
TCGTCTTTCG ATGTAATAGC CGGATGTGGA GCAGCCAAAC CATACACAGC | 650 |
CCTTGCGCTT CAGACCATCT CGAGGCATTT CCGTTGCTTA AGGGATGCGA | 700 |
TATCCGGACA AATCTTGGTG ATAAGGAAAA GTTTAGGAGG GGAACAGGAT | 750 |
GGATCAGATG GGAGAGGAGT GGGGATAAGC AGGTTAAGGA ATGTTGATCA | 800 |
ACAGGTAAGG CAACAAAGAG CGTTGCAGCG GTTAGGTGTG ATGCAACCTC | 850 |
ACACTTGGCG GCCTCAACGC GGTTTACCAG ATTCTTCTGT TTTGGTTCTC | 900 |
CGTGCTTGGC TATTTGAGCA TTTCCTCCAC CCTTATCCAA AGGATTCAGA | 950 |
CAAGATCATG CTCGCTAGAC AAACGGGGTT GAGCCGAGGC CAGGTATCGA | 1000 |
ACTGGTTCAT AAATGCGCGT GTGCGTCTCT GGAAACCGAT GGTGGAGGAG | 1050 |
ATGTACAAGG AGGAATTCAC AGATGCATTG CAGGAGAATG ATCCCAACCA | 1100 |
GTCTTCTGAA AACACACCAG AAATCACCGA GATTCAAGAG CTGCAAACTG | 1150 |
AGTCTAGTTC CAACAATGGG CATGTACCTG GTGTGGCAAG CAGTAGCATG | 1200 |
AGACAAAACA CAGTGGCCCA TGGTGGTGAC CGGTTCATGA TGGTGACTGA | 1250 |
CATGACAAGA AATGGTAATG GTGGGATGTC TTTAACGTTG GGGATTCAGA | 1300 |
ATTCCGATGC TCGTGGCGAT GTTCCTATGT CCGGTGGGAT AGATAACTAC | 1350 |
AAGAATACCA TCTCGGGAAC CGATCTACAG TACTTAAACT CTCGCAACCA | 1400 |
CCAGCACCAG ATTGGCTCTT CACAATTGTT GCATGATTTT GTAGCTTGA | 1450 |
>AT2G16400.1 longest ORF length:482
MATYYKTGSS EIYSRPEFVP GNAMNYTNSF TETFPRDSTN NVSPSKEIQV | 50 |
LSSLGGVSQM VEIQDSGSWR DQEDNDRNRF PVMRRLGLSS QIETSRGNNN | 100 |
NEYATQVVSG FTRTIHNSKY LKAAQELLDE TVNVKKALKQ FQPEGDKINE | 150 |
VKEKNLQTNT AEIPQAERQE LQSKLSKLLS ILDEVDRNYK QYYHQMQIVV | 200 |
SSFDVIAGCG AAKPYTALAL QTISRHFRCL RDAISGQILV IRKSLGGEQD | 250 |
GSDGRGVGIS RLRNVDQQVR QQRALQRLGV MQPHTWRPQR GLPDSSVLVL | 300 |
RAWLFEHFLH PYPKDSDKIM LARQTGLSRG QVSNWFINAR VRLWKPMVEE | 350 |
MYKEEFTDAL QENDPNQSSE NTPEITEIQE LQTESSSNNG HVPGVASSSM | 400 |
RQNTVAHGGD RFMMVTDMTR NGNGGMSLTL GIQNSDARGD VPMSGGIDNY | 450 |
KNTISGTDLQ YLNSRNHQHQ IGSSQLLHDF VA | 500 |
|