fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G16910 AMS, bHLH021 ABORTED MICROSPORES, basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1)

>AT2G16910.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, HindIII, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, XhoI
Name Recognition sequence Cut positions
EcoRI G|AATTC 1251
EcoRV GAT|ATC 598
HpaI GTT|AAC 820
SacI GAGCT|C 318, 391
SmaI CCC|GGG 1194
SpeI A|CTAGT 384
StyI C|C[AT][AT]GG 695
XbaI T|CTAGA 1528


Click here to view TAIR data

>AT2G16910.1 length:1716
ATGGAGAGTA ATATGCAAAA CTTGTTGGAG AAATTGAGGC CTCTTGTGGG 
50
TGCAAGGGCT TGGGATTATT GTGTTCTTTG GAGACTAAAC GAAGACCAAA 
100
GGTTTGTGAA GTGGATGGGA TGTTGTTGTG GTGGGACAGA ACTCATAGCG 
150
GAGAATGGAA CAGAAGAGTT TAGCTACGGA GGTTGTAGGG ATGTTATGTT 
200
TCATCATCCT CGGACCAAAT CTTGTGAATT TCTTTCCCAT CTTCCAGCTT 
250
CCATACCTCT TGATTCCGGG ATATATGCGG AGACTCTTCT GACTAACCAG 
300
ACTGGTTGGT TGAGTGAGAG CTCAGAACCA AGTTTTATGC AGGAAACAAT 
350
CTGTACTAGG GTTTTGATTC CTATACCGGG AGGACTAGTG GAGCTCTTTG 
400
CGACCAGACA TGTCGCTGAA GATCAGAACG TGGTGGATTT TGTAATGGGA 
450
CATTGCAACA TGTTGATGGA CGATTCTGTA ACGATAAACA TGATGGTAGC 
500
AGACGAGGTC GAATCGAAGC CGTACGGGAT GTTATCCGGT GACATCCAGC 
550
AAAAGGGTTC CAAAGAAGAA GATATGATGA ATCTCCCTTC GTCTTACGAT 
600
ATCTCTGCTG ATCAGATCCG ACTCAATTTC TTGCCTCAGA TGAGTGATTA 
650
CGAGACACAA CACTTGAAGA TGAAGAGTGA TTATCATCAT CAAGCCTTGG 
700
GGTATCTCCC AGAGAATGGT AACAAGGAAA TGATGGGTAT GAACCCATTT 
750
AACACGGTGG AAGAAGATGG GATTCCAGTG ATTGGAGAGC CTAGCTTGCT 
800
TGTGAATGAA CAGCAAGTTG TTAACGATAA GGATATGAAT GAGAACGGTA 
850
GGGTGGATTC AGGGTCGGAT TGCAGCGACC AGATTGATGA TGAAGATGAT 
900
CCAAAGTACA AGAAGAAGTC AGGAAAAGGA TCTCAAGCCA AGAACCTGAT 
950
GGCTGAGAGA CGGAGGAGGA AGAAGCTAAA CGATAGGCTT TATGCTCTCC 
1000
GGTCGCTTGT TCCCAGGATA ACCAAGTTGG ACAGGGCGTC GATTCTTGGC 
1050
GATGCAATCA ACTACGTTAA GGAGTTGCAG AATGAGGCAA AGGAGCTTCA 
1100
AGACGAGCTT GAAGAGAACT CAGAGACTGA GGATGGATCT AATAGGCCAC 
1150
AAGGAGGGAT GAGCCTGAAC GGGACAGTGG TCACTGGGTT TCACCCGGGG 
1200
CTTTCATGTA ACTCCAACGT TCCTAGCGTG AAGCAAGATG TTGATCTTGA 
1250
GAATTCCAAT GATAAAGGAC AAGAAATGGA GCCACAGGTG GACGTGGCTC 
1300
AGTTAGATGG CAGAGAGTTT TTCGTAAAGG TGATTTGCGA ATACAAACCA 
1350
GGAGGCTTCA CAAGGCTAAT GGAGGCACTG GATTCTCTTG GACTAGAAGT 
1400
CACAAATGCT AACACGACTC GCTACCTCAG CCTGGTCTCC AATGTCTTCA 
1450
AAGTCGAGAA AAATGATAAC GAGATGGTCC AAGCTGAACA CGTAAGGAAC 
1500
TCGTTGCTGG AAATAACCCG GAACACATCT AGAGGATGGC AAGATGATCA 
1550
GATGGCTACA GGCTCTATGC AAAACGAAAA GAACGAAGTT GATTATCAAC 
1600
ACTATGATGA TCACCAGCAT CACAATGGTC ATCATCACCC ATTTGATCAC 
1650
CAGATGAATC AGAGCGCTCA TCATCATCAC CACCACCAAC ACATCAACCA 
1700
TTACCACAAC CAATAA
1750

>AT2G16910.1 longest ORF length:571
MESNMQNLLE KLRPLVGARA WDYCVLWRLN EDQRFVKWMG CCCGGTELIA 
50
ENGTEEFSYG GCRDVMFHHP RTKSCEFLSH LPASIPLDSG IYAETLLTNQ 
100
TGWLSESSEP SFMQETICTR VLIPIPGGLV ELFATRHVAE DQNVVDFVMG 
150
HCNMLMDDSV TINMMVADEV ESKPYGMLSG DIQQKGSKEE DMMNLPSSYD 
200
ISADQIRLNF LPQMSDYETQ HLKMKSDYHH QALGYLPENG NKEMMGMNPF 
250
NTVEEDGIPV IGEPSLLVNE QQVVNDKDMN ENGRVDSGSD CSDQIDDEDD 
300
PKYKKKSGKG SQAKNLMAER RRRKKLNDRL YALRSLVPRI TKLDRASILG 
350
DAINYVKELQ NEAKELQDEL EENSETEDGS NRPQGGMSLN GTVVTGFHPG 
400
LSCNSNVPSV KQDVDLENSN DKGQEMEPQV DVAQLDGREF FVKVICEYKP 
450
GGFTRLMEAL DSLGLEVTNA NTTRYLSLVS NVFKVEKNDN EMVQAEHVRN 
500
SLLEITRNTS RGWQDDQMAT GSMQNEKNEV DYQHYDDHQH HNGHHHPFDH 
550
QMNQSAHHHH HHQHINHYHN Q
600