fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G17040 ANAC036 NAC domain containing protein 36 (.1)

>AT2G17040.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BglII, EcoRI, EcoRV, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 271
HindIII A|AGCTT 291
HpaI GTT|AAC 814
NcoI C|CATGG 142, 787
SacI GAGCT|C 16
SmaI CCC|GGG 21
StyI C|C[AT][AT]GG 142, 199, 787


Click here to view TAIR data

>AT2G17040.1 length:831
ATGGGAAAAG ATATTGAGCT CCCGGGTTTT AGGTTCCACC CGACTGAGGA 
50
AGAGCTTCTT GATTTCTACC TCAAGAACAT GGTTTACGGT AAGAGATCGA 
100
GTGTCGAAGT CATTGGTTTC CTTAACATAT ACCGTCATGA TCCATGGGAC 
150
TTACCTGGTT TATCGAGAAT CGGGGAGAGG GAATGGTACT TCTTTGTACC 
200
AAGGGAAAGG AAGCATGGGA ACGGTGGGAG GCCAAGCAGG ACAACTGAAA 
250
AAGGATATTG GAAAGCAACT GGATCCGATC GTAAAATCAT AAGCTTGTCT 
300
GAGCCAAAAC GTGTTATAGG GCTCAAGAAG ACGCTTGTGT TCTATAGAGG 
350
AAGAGCACCA GGAGGAAGCA AGACTGATTG GGTGATGAAC GAGTTTCGGA 
400
TGCCCGATAA TTGCTCCTTA CCAAAGGATG TTGTGCTTTG TAAGATATAT 
450
AGAAAAGCTA CTTCATTGAA AGTATTGGAG CAAAGGGCAG AGATGGAAGC 
500
TAAGATGAAT CAAACATGTC CTAACTCTCC TCTTTCGTCT TCCGAGACGA 
550
TTTCTTTCGT TGGTAAAGAA GAAAACATGA TGACTTCGTT CCGTGCTCCT 
600
CAAGTAATAG CTATGGAAGA AGCAAACAAG ATCCAAATGC ATCAAGAAAA 
650
CGCGAAAACC GAAGAGAAAC AAAGAGAAGC AGAGACCAAA GAACCTTCTT 
700
CATCACTGAA GCTACCGTTT GGAAGTTTAC CAGAGCTACA ATTACCAAAA 
750
CCAGGAGTAG AATGGGACCA GTTGTTGAGT ATAAGCCCAT GGCTCCAGAA 
800
TCTTACACCA ATAGTTAACA TATATTGGTA G
850

>AT2G17040.1 longest ORF length:276
MGKDIELPGF RFHPTEEELL DFYLKNMVYG KRSSVEVIGF LNIYRHDPWD 
50
LPGLSRIGER EWYFFVPRER KHGNGGRPSR TTEKGYWKAT GSDRKIISLS 
100
EPKRVIGLKK TLVFYRGRAP GGSKTDWVMN EFRMPDNCSL PKDVVLCKIY 
150
RKATSLKVLE QRAEMEAKMN QTCPNSPLSS SETISFVGKE ENMMTSFRAP 
200
QVIAMEEANK IQMHQENAKT EEKQREAETK EPSSSLKLPF GSLPELQLPK 
250
PGVEWDQLLS ISPWLQNLTP IVNIYW
300