fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G17180 DAZ1 DUO1-ACTIVATED ZINC FINGER 1, C2H2-like zinc finger protein (.1)

>AT2G17180.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BglII, EcoRI, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI
Name Recognition sequence Cut positions
BamHI G|GATCC 348
EcoRV GAT|ATC 34
StyI C|C[AT][AT]GG 142, 788
XbaI T|CTAGA 649
XhoI C|TCGAG 339


Click here to view TAIR data

>AT2G17180.1 length:813
ATGTCGAACA CTTCAAACTC CGATCCCAAT TCCGATATCC CATTTGCTTC 
50
CTCCAATGTA ACTCTTCCTA GTTACAATCA AAACCCAAGA AGAAAACGTA 
100
CTAAACTCAC CAACAACGAA GTCGGTTCTT CTTCGTCTTC TCCAAGGCCT 
150
AAACCGGTCA CGCAACCGGA CCCTGATGCT TCACAAATCG CACGACCATG 
200
TACTGAATGT GGTAAACAAT TCGGGTCACT GAAGGCACTC TTTGGACACA 
250
TGAGATGTCA CCCTGAACGT CAGTGGCGTG GCATCAACCC TCCTTCTAAC 
300
TTCAAACGTA GGATCAACTC AAACGCTGCG TCATCATCCT CGAGTTGGGA 
350
TCCATCTGAG GAAGAGCATA ACATAGCCTC CTGTTTACTA ATGATGGCTA 
400
ATGGTGATGT CCCAACCCGT TCAAGTGAAG TTGAGGAACG GTTTGAGTGT 
450
GATGGTTGTA AGAAAGTGTT TGGGTCACAT CAAGCGTTAG GCGGACATAG 
500
AGCAACACAT AAAGACGTCA AAGGATGTTT CGCCAATAAA AACATAACCG 
550
AAGATCCTCC TCCTCCACCT CCTCAAGAGA TCGTTGATCA AGATAAGGGC 
600
AAGAGTGTGA AGTTGGTCTC GGGGATGAAT CATCGATGTA ACATCTGTTC 
650
TAGAGTGTTC TCCAGTGGTC AAGCGTTAGG AGGTCACATG AGATGTCATT 
700
GGGAGAAAGA TCAGGAAGAG AACCAAGTCA GGGGCATTGA TCTTAATGTT 
750
CCTGCGGCGA CATCTTCAGA CACAACGTTA GGTTGTTCCT TGGATCTTAG 
800
GTTAGGACTT TGA
850

>AT2G17180.1 longest ORF length:270
MSNTSNSDPN SDIPFASSNV TLPSYNQNPR RKRTKLTNNE VGSSSSSPRP 
50
KPVTQPDPDA SQIARPCTEC GKQFGSLKAL FGHMRCHPER QWRGINPPSN 
100
FKRRINSNAA SSSSSWDPSE EEHNIASCLL MMANGDVPTR SSEVEERFEC 
150
DGCKKVFGSH QALGGHRATH KDVKGCFANK NITEDPPPPP PQEIVDQDKG 
200
KSVKLVSGMN HRCNICSRVF SSGQALGGHM RCHWEKDQEE NQVRGIDLNV 
250
PAATSSDTTL GCSLDLRLGL 
300