fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G17410 ARID/BRIGHT DNA-binding domain-containing protein (.1.2)

>AT2G17410.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, HindIII, HpaI, NcoI, NdeI, NheI, NotI, PacI, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
EcoRI G|AATTC 138, 285
EcoRV GAT|ATC 418
KpnI GGTAC|C 73
PstI CTGCA|G 368, 464, 569, 698
PvuII CAG|CTG 2081
StyI C|C[AT][AT]GG 2233


Click here to view TAIR data

>AT2G17410.1 length:2361
ATGGAGAATT TGACGGAAAT AGAATCAACG ATGGAGAGTT TAACGGAAAT 
50
GGAGAGTGAG AGAGTTGAAC AGGGTACCGA TAAGGAAATT GGAAGTGGAG 
100
AGAAAAGGCA GGATGATGTA AAGGAAACGG AGAATGAGAA TTCTGGAGAG 
150
AGAGTAGGAG AGGAAGCTCC TGTCAGGGAA CATGAAGATT CTCCATGTCT 
200
CATTGTTATT GAAGAAGGTA CTTCCCTAGC TTCCCTTGAG GAGGTGACCA 
250
ATGCTGATGA TCTGCCGAAG ATTGATGATG AGAAGAATTC CCAATTTGAA 
300
ACAAGCCCGC ATCCAAGTCC TTCTCCTTCA GTAGCTTTAG ACACTGAAGA 
350
AGGGTTAATC AACCCTACTG CAGAAGACAC TGTAGAAGAG AACATAGTGT 
400
CTAGCGAAGT AAGTTCGGAT ATCTTGAAAG ATGACGGAGA TGCCGTCGAG 
450
GTTGACAGAG ATACTGCAGA AGTCCAGGAA GAAACGGCCA ACATACCTGA 
500
ATCCAAACTC TCGGAGGACA CAGGATCACC TCATCATCAT GCTGATATTC 
550
TGATGGTGCA GGAAAAAGCT GCAGAAGAAC ATGACATGAT AGCCTCTGGA 
600
GACCATGAAG AATTTCCAGT CAATCCTGAT AACAAACACT CTGAAGAAAA 
650
TCAGTCACCA CATCATCATG CTAATAATGT GATGGAGCAG GACCAAGCTG 
700
CAGAAGAACG TGAGATCATA TCCCCAGGAG AACATAAGGA AATTCCAGCC 
750
AATCCTGATA CTAAAGTTGT TGAGGAGAAC AATGACAGGA TAGATGAGGG 
800
TGAGGCTAAC AATTTGAATT TGGCTGGCGA TGGAAGTGGA GCAGTCGATC 
850
ATGATTACTT GACCAAAACG GAGCTGGACA AAGTGCTAGA GGTGCCTGGT 
900
TCTGAGACCA TATCAAAACT GGAGGATAGG CCATCTGAGC ATCTCTCAGA 
950
AACCTCAATG AACGTGGAAA AAGAACTAGA AATGCCTGCC GTTGAAATTT 
1000
TGCCAGACAA TGACAAAAAC TCTGATGTGT TGGCAGTTGG AGTTTCTGGA 
1050
GACAGTGACA ATGTGGTATC TGTCTTGCCC GCTTCCCAAA CTTCCTCTGA 
1100
TCGTGATGAA GGAATGATTA CAGTTGATGC TGAACCTACG GAAGACATGA 
1150
AACTTGATGT TCCAGATTCT AAATTGGTTA CTGATACTAC TGTTGACTCT 
1200
ACTAATAACA AGGATGCCCA TGTTGAGGCT AATACTGAAA GGCAAGATAA 
1250
TTCTAGTGCA CTTGTGCTAA ATGATGCAAA TAATGAAAGT GCACCAGTGA 
1300
AACGTGTACC TGGTCCTTAT GTTGCATCTT CCAATATAAA GTCTGAAGCG 
1350
CGGGGTAGTG GAGATTTGAA CAATGGAGTA CATAAAATAG TTCGGACCCC 
1400
ACCTGTCTTT GATGGGACCA TGCGCGCAAA GCGCTCTTTC CTCTTGGATG 
1450
ATGCGTCTGA TGGTAATGAA TCTGGAACGG AAGAGGATCA ATCTGCTTTT 
1500
ATGAAAGAAT TGGATAGTTT TTTTAGAGAG CGAAACATGG ATTTCAAACC 
1550
TCCAAAATTT TACGGGGAGG GACTGAACTG CCTCAAGTTG TGGAGAGCTG 
1600
TAACTAGATT GGGCGGATAT GACAAGGTTA CTGGAAGCAA ATTATGGCGG 
1650
CAAGTGGGAG AGTCTTTCAG GCCCCCAAAG ACATGTACAA CAGTATCATG 
1700
GACTTTCCGA GGTTTCTACG AAAAGGCTCT TCTTGAATAT GAGCGGCATA 
1750
AAGTTAGTGA AGGTGAACTT CAGATACCCC TTCCGTTGGA ACTAGAACCG 
1800
ATGAATATTG ATAATCAGGC GTCTGGATCA GGGAGAGCAA GGAGAGATGC 
1850
AGCATCACGT GCTATGCAAG GTTGGCATTC ACAGCGTCTT AATGGTAACG 
1900
GTGAAGTTAG TGACCCTGCA ATCAAGGATA AGAACTTAGT TCTTCATCAA 
1950
AAGCGCGAAA AACAGATTGG AACCACCCCT GGTTTGCTCA AACGTAAGAG 
2000
GGCTGCTGAA CATGGTGCAA AAAATGCCAT CCATGTATCT AAATCTATGT 
2050
TGGATGTGAC TGTTGTTGAT GTTGGACCAC CAGCTGACTG GGTGAAGATT 
2100
AACGTACAGA GAACGCAAGA TTGCTTTGAG GTGTATGCAT TAGTCCCAGG 
2150
ATTAGTCCGT GAAGAGGTCC GAGTCCAATC AGATCCGGCT GGGCGGTTAG 
2200
TAATAAGTGG CGAACCCGAG AACCCTATGA ATCCTTGGGG AGCTACTCCT 
2250
TTCAAAAAGG TGGTAAGTTT ACCAACGAGA ATCGATCCGC ATCACACATC 
2300
GGCTGTGGTA ACCCTAAACG GGCAGTTATT TGTTCGTGTG CCTCTGGAGC 
2350
AATTGGAGTA G
2400

>AT2G17410.1 longest ORF length:786
MENLTEIEST MESLTEMESE RVEQGTDKEI GSGEKRQDDV KETENENSGE 
50
RVGEEAPVRE HEDSPCLIVI EEGTSLASLE EVTNADDLPK IDDEKNSQFE 
100
TSPHPSPSPS VALDTEEGLI NPTAEDTVEE NIVSSEVSSD ILKDDGDAVE 
150
VDRDTAEVQE ETANIPESKL SEDTGSPHHH ADILMVQEKA AEEHDMIASG 
200
DHEEFPVNPD NKHSEENQSP HHHANNVMEQ DQAAEEREII SPGEHKEIPA 
250
NPDTKVVEEN NDRIDEGEAN NLNLAGDGSG AVDHDYLTKT ELDKVLEVPG 
300
SETISKLEDR PSEHLSETSM NVEKELEMPA VEILPDNDKN SDVLAVGVSG 
350
DSDNVVSVLP ASQTSSDRDE GMITVDAEPT EDMKLDVPDS KLVTDTTVDS 
400
TNNKDAHVEA NTERQDNSSA LVLNDANNES APVKRVPGPY VASSNIKSEA 
450
RGSGDLNNGV HKIVRTPPVF DGTMRAKRSF LLDDASDGNE SGTEEDQSAF 
500
MKELDSFFRE RNMDFKPPKF YGEGLNCLKL WRAVTRLGGY DKVTGSKLWR 
550
QVGESFRPPK TCTTVSWTFR GFYEKALLEY ERHKVSEGEL QIPLPLELEP 
600
MNIDNQASGS GRARRDAASR AMQGWHSQRL NGNGEVSDPA IKDKNLVLHQ 
650
KREKQIGTTP GLLKRKRAAE HGAKNAIHVS KSMLDVTVVD VGPPADWVKI 
700
NVQRTQDCFE VYALVPGLVR EEVRVQSDPA GRLVISGEPE NPMNPWGATP 
750
FKKVVSLPTR IDPHHTSAVV TLNGQLFVRV PLEQLE
800