fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G18060 ANAC037, VND1 Arabidopsis NAC domain containing protein 37, vascular related NAC-domain protein 1 (.1)

>AT2G18060.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRV, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, XbaI
Name Recognition sequence Cut positions
EcoRI G|AATTC 1042
HindIII A|AGCTT 801
HpaI GTT|AAC 550
NcoI C|CATGG 151, 263
SacI GAGCT|C 510
StyI C|C[AT][AT]GG 151, 263
XhoI C|TCGAG 409


Click here to view TAIR data

>AT2G18060.1 length:1098
ATGGAGCCAA TGGAATCTTG TAGCGTTCCT CCAGGATTTA GGTTCCATCC 
50
GACGGACGAA GAGCTTGTCG GGTACTATCT AAGGAAGAAA ATCGCATCGC 
100
AAAAGATTGA TCTCGACGTC ATCAGAGACA TCGATCTCTA CAGAATAGAA 
150
CCATGGGATC TACAAGAACA ATGTCGAATC GGTTATGAGG AACAAAATGA 
200
ATGGTATTTT TTTAGTCACA AGGACAAGAA ATATCCAACG GGGACAAGAA 
250
CTAATAGAGC GACCATGGCT GGATTTTGGA AAGCCACGGG AAGAGACAAA 
300
GCTGTTTACG ACAAAACAAA ACTAATTGGT ATGAGGAAAA CACTTGTGTT 
350
CTACAAAGGA CGTGCACCTA ATGGCAAGAA ATCCGATTGG ATCATGCATG 
400
AGTACCGGCT CGAGTCAGAT GAGAATGCAC CGCCCCAGGA AGAAGGATGG 
450
GTGGTTTGTA GAGCATTCAA AAAAAGAGCT ACAGGGCAAG CCAAGAACAC 
500
GGAAACTTGG AGCTCAAGTT ACTTTTACGA TGAAGTTGCA CCGAATGGAG 
550
TTAACTCGGT TATGGACCCC ATTGATTACA TATCTAAGCA GCAACATAAC 
600
ATTTTTGGGA AAGGTTTGAT GTGTAAGCAA GAACTAGAAG GAATGGTTGA 
650
TGGTATAAAC TATATACAAT CGAATCAATT CATTCAGCTC CCACAACTCC 
700
AAAGCCCTTC TCTCCCGCTG ATGAAAAGAC CTTCAAGCTC GATGTCCATA 
750
ACATCAATGG ATAACAATTA CAACTATAAA CTCCCATTAG CGGATGAAGA 
800
AAGCTTCGAG TCATTCATAA GAGGAGAGGA TAGAAGGAAG AAGAAAAAGC 
850
AAGTAATGAT GACGGGAAAT TGGAGAGAGT TAGACAAGTT TGTTGCTTCA 
900
CAACTTATGA GCCAAGAAGA CAATGGAACT TCAAGTTTCG CAGGTCATCA 
950
TATAGTTAAT GAAGATAAAA ACAACAATGA TGTGGAGATG GATTCGTCAA 
1000
TGTTTTTGAG CGAAAGAGAA GAAGAAAACA GGTTCGTCAG TGAATTCTTG 
1050
AGTACAAACT CGGATTATGA TATTGGGATT TGCGTATTTG ATAATTGA
1100

>AT2G18060.1 longest ORF length:365
MEPMESCSVP PGFRFHPTDE ELVGYYLRKK IASQKIDLDV IRDIDLYRIE 
50
PWDLQEQCRI GYEEQNEWYF FSHKDKKYPT GTRTNRATMA GFWKATGRDK 
100
AVYDKTKLIG MRKTLVFYKG RAPNGKKSDW IMHEYRLESD ENAPPQEEGW 
150
VVCRAFKKRA TGQAKNTETW SSSYFYDEVA PNGVNSVMDP IDYISKQQHN 
200
IFGKGLMCKQ ELEGMVDGIN YIQSNQFIQL PQLQSPSLPL MKRPSSSMSI 
250
TSMDNNYNYK LPLADEESFE SFIRGEDRRK KKKQVMMTGN WRELDKFVAS 
300
QLMSQEDNGT SSFAGHHIVN EDKNNNDVEM DSSMFLSERE EENRFVSEFL 
350
STNSDYDIGI CVFDN
400