fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G18160 GBF5, ATBZIP2 G-BOX BINDING FACTOR 5, basic leucine-zipper 2 (.1)

>AT2G18160.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, EcoRI, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 209
EcoRV GAT|ATC 499
SacI GAGCT|C 27
SalI G|TCGAC 82


Click here to view TAIR data

>AT2G18160.1 length:516
ATGGCGTCAT CTAGCAGCAC ATACCGGAGC TCAAGCTCTT CCGACGGTGG 
50
TAATAATAAC CCGTCGGACT CCGTCGTCAC CGTCGACGAA CGAAAACGTA 
100
AAAGAATGTT ATCGAACAGA GAATCTGCAC GTAGGTCAAG GATGCGTAAA 
150
CAGAAACACG TTGATGATCT AACGGCTCAG ATCAATCAGC TATCAAACGA 
200
CAACCGTCAG ATCTTGAACA GCCTCACCGT AACATCTCAG CTTTACATGA 
250
AGATCCAAGC CGAGAACTCT GTTCTCACCG CTCAGATGGA GGAGCTTAGC 
300
ACCAGACTCC AATCTCTCAA CGAGATCGTT GATCTTGTTC AATCCAACGG 
350
TGCAGGATTT GGTGTTGACC AGATCGACGG CTGTGGTTTT GATGATCGTA 
400
CGGTTGGGAT CGACGGATAT TACGATGATA TGAATATGAT GAGTAATGTT 
450
AATCATTGGG GTGGTTCGGT TTACACTAAC CAACCCATTA TGGCTAATGA 
500
TATCAATATG TATTGA
550

>AT2G18160.1 longest ORF length:171
MASSSSTYRS SSSSDGGNNN PSDSVVTVDE RKRKRMLSNR ESARRSRMRK 
50
QKHVDDLTAQ INQLSNDNRQ ILNSLTVTSQ LYMKIQAENS VLTAQMEELS 
100
TRLQSLNEIV DLVQSNGAGF GVDQIDGCGF DDRTVGIDGY YDDMNMMSNV 
150
NHWGGSVYTN QPIMANDINM Y
200