|
|
|
|
|
|
|
|
| Locus | Common name | Short description |
| AT2G18280 | AtTLP2 | tubby like protein 2 (.1.2) |
>AT2G18280.2 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BglII, EcoRI, EcoRV, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, XbaI
| Name | Recognition sequence | Cut positions |
| BamHI | G|GATCC | 284 |
| HindIII | A|AGCTT | 882 |
| NcoI | C|CATGG | 139, 1097 |
| SacI | GAGCT|C | 700 |
| StyI | C|C[AT][AT]GG | 139, 1097 |
| XhoI | C|TCGAG | 215, 341 |
Click here to view TAIR data
>AT2G18280.2 length:1185
ATGTCTTTGA AAAGCATCCT TCGTGATCTG AAGGAAGTGA GGGATGGACT | 50 |
TGGAGGCATC TCCAAGAGAA GCTGGTCAAA GTCGTCTCAC ATTGCTCCTG | 100 |
ATCAAACAAC TCCACCACTG GATAACATAC CACAGAGCCC ATGGGCTTCT | 150 |
TTGCCGCCTG AGTTGCTTCA TGACATTATC TGGAGGGTTG AAGAGAGTGA | 200 |
GACAGCTTGG CCCGCTCGAG CTGCCGTTGT CTCTTGTGCT TCAGTATGTA | 250 |
AATCATGGAG AGGAATCACT ATGGAGATTG TGAGGATCCC TGAGCAGTGT | 300 |
GGGAAGCTCA CTTTTCCAAT CTCATTGAAA CAGCCGGGGC CTCGAGACTC | 350 |
TCCAATTCAA TGTTTTATTA AGAGGAACAG AGCAACAGCT ACATACATTC | 400 |
TCTATTATGG TTTGATGCCT TCGGAGACTG AGAACGACAA ACTGTTGTTA | 450 |
GCAGCAAGAA GGATTAGAAG AGCGACATGC ACAGACTTTA TAATCTCCCT | 500 |
ATCTGCAAAG AACTTCTCAC GGAGCAGCAG TACTTATGTT GGCAAATTAA | 550 |
GGTCTGGTTT TCTGGGAACC AAGTTCACAA TATATGACAA CCAAACAGCA | 600 |
TCATCCACAG CACAAGCCCA ACCTAACCGA AGACTCCACC CGAAACAAGC | 650 |
GGCTCCTAAA CTACCTACGA ATAGCTCTAC CGTAGGAAAC ATAACCTACG | 700 |
AGCTCAATGT TCTTCGCACA AGGGGACCTA GAAGAATGCA CTGCGCTATG | 750 |
GATTCTATAC CCCTCTCTTC TGTTATTGCT GAACCGTCAG TAGTTCAAGG | 800 |
CATAGAAGAG GAAGTCTCTT CCTCTCCTTC ACCAAAAGGA GAAACCATCA | 850 |
CAACAGACAA AGAGATTCCT GATAATTCTC CAAGCTTAAG GGACCAACCG | 900 |
CTAGTTCTCA AAAACAAATC CCCAAGATGG CATGAGCAGT TGCAGTGCTG | 950 |
GTGCCTCAAC TTCAAGGGAA GAGTGACTGT GGCTTCAGTT AAGAATTTCC | 1000 |
AGCTTGTTGC AGAGATTGAC GCTTCTTTGG ATGCGCCGCC TGAAGAACAT | 1050 |
GAGAGGGTGA TCTTACAGTT TGGCAAAATC GGTAAGGATA TTTTCACCAT | 1100 |
GGATTATCGC TACCCTCTAT CTGCTTTTCA AGCCTTTGCT ATATGCATTA | 1150 |
GCAGCTTTGA CACCAAACCG GCATGTGAAG GGTAA | 1200 |
>AT2G18280.2 longest ORF length:394
MSLKSILRDL KEVRDGLGGI SKRSWSKSSH IAPDQTTPPL DNIPQSPWAS | 50 |
LPPELLHDII WRVEESETAW PARAAVVSCA SVCKSWRGIT MEIVRIPEQC | 100 |
GKLTFPISLK QPGPRDSPIQ CFIKRNRATA TYILYYGLMP SETENDKLLL | 150 |
AARRIRRATC TDFIISLSAK NFSRSSSTYV GKLRSGFLGT KFTIYDNQTA | 200 |
SSTAQAQPNR RLHPKQAAPK LPTNSSTVGN ITYELNVLRT RGPRRMHCAM | 250 |
DSIPLSSVIA EPSVVQGIEE EVSSSPSPKG ETITTDKEIP DNSPSLRDQP | 300 |
LVLKNKSPRW HEQLQCWCLN FKGRVTVASV KNFQLVAEID ASLDAPPEEH | 350 |
ERVILQFGKI GKDIFTMDYR YPLSAFQAFA ICISSFDTKP ACEG | 400 |