fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G18300 bHLH064, HBI1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1), basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.2), basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.3)

>AT2G18300.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HpaI, KpnI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, XhoI
Name Recognition sequence Cut positions
HindIII A|AGCTT 27
NcoI C|CATGG 162
NdeI CA|TATG 295
SacI GAGCT|C 557
StyI C|C[AT][AT]GG 162
XbaI T|CTAGA 891


Click here to view TAIR data

>AT2G18300.1 length:1008
ATGTTGGAAG GTCTTGTCTC TCAAGAAAGC TTGTCCTTAA ACTCTATGGA 
50
CATGTCTGTA CTTGAAAGGC TTAAATGGGT ACAACAGCAA CAACAGCAAC 
100
TGCAACAAGT TGTGTCCCAT AGCAGTAATA ATTCACCTGA ACTTCTTCAG 
150
ATACTTCAGT TCCATGGAAG CAACAATGAT GAGTTGTTGG AGAGTAGTTT 
200
CAGCCAATTT CAAATGCTTG GATCTGGTTT TGGACCAAAC TATAACATGG 
250
GTTTTGGTCC TCCACATGAA TCCATTTCAA GAACAAGTAG CTGCCATATG 
300
GAACCTGTGG ATACAATGGA GGTTTTGTTG AAGACCGGTG AAGAAACCAG 
350
AGCCGTTGCC TTGAAGAACA AGAGAAAACC AGAGGTTAAG ACAAGGGAAG 
400
AGCAAAAGAC AGAGAAGAAG ATCAAAGTAG AGGCTGAGAC AGAGTCAAGC 
450
ATGAAAGGAA AATCAAACAT GGGAAACACT GAAGCATCTT CAGACACTTC 
500
AAAGGAGACA TCGAAAGGAG CTTCAGAGAA TCAGAAATTA GATTATATCC 
550
ACGTGAGAGC TCGTCGAGGC CAAGCCACTG ACAGACACAG CTTAGCAGAA 
600
AGGGCGAGAA GAGAAAAGAT CAGCAAGAAA ATGAAATATC TGCAAGATAT 
650
TGTGCCTGGA TGCAATAAGG TCACAGGAAA AGCTGGTATG CTTGATGAGA 
700
TCATCAATTA TGTTCAATGT CTCCAAAGAC AAGTCGAGTT CCTGTCGATG 
750
AAACTTGCTG TCTTGAACCC GGAACTAGAG CTTGCCGTGG AAGATGTATC 
800
CGTAAAACAG GCTTACTTTA CAAATGTAGT TGCTTCAAAG CAATCAATAA 
850
TGGTTGATGT GCCATTGTTT CCGTTAGACC AGCAAGGATC TCTAGATTTG 
900
TCTGCGATAA ACCCGAACCA AACGACATCT ATCGAAGCTC CATCTGGAAG 
950
CTGGGAAACT CAATCACAGA GTCTCTACAA CACATCTAGC CTCGGTTTTC 
1000
ATTACTAA
1050

>AT2G18300.1 longest ORF length:335
MLEGLVSQES LSLNSMDMSV LERLKWVQQQ QQQLQQVVSH SSNNSPELLQ 
50
ILQFHGSNND ELLESSFSQF QMLGSGFGPN YNMGFGPPHE SISRTSSCHM 
100
EPVDTMEVLL KTGEETRAVA LKNKRKPEVK TREEQKTEKK IKVEAETESS 
150
MKGKSNMGNT EASSDTSKET SKGASENQKL DYIHVRARRG QATDRHSLAE 
200
RARREKISKK MKYLQDIVPG CNKVTGKAGM LDEIINYVQC LQRQVEFLSM 
250
KLAVLNPELE LAVEDVSVKQ AYFTNVVASK QSIMVDVPLF PLDQQGSLDL 
300
SAINPNQTTS IEAPSGSWET QSQSLYNTSS LGFHY
350