fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G18300 bHLH064, HBI1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1), basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.2), basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.3)

>AT2G18300.2 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HpaI, KpnI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, XhoI
Name Recognition sequence Cut positions
HindIII A|AGCTT 27
NcoI C|CATGG 162
NdeI CA|TATG 295
SacI GAGCT|C 557
StyI C|C[AT][AT]GG 162
XbaI T|CTAGA 897


Click here to view TAIR data

>AT2G18300.2 length:1014
ATGTTGGAAG GTCTTGTCTC TCAAGAAAGC TTGTCCTTAA ACTCTATGGA 
50
CATGTCTGTA CTTGAAAGGC TTAAATGGGT ACAACAGCAA CAACAGCAAC 
100
TGCAACAAGT TGTGTCCCAT AGCAGTAATA ATTCACCTGA ACTTCTTCAG 
150
ATACTTCAGT TCCATGGAAG CAACAATGAT GAGTTGTTGG AGAGTAGTTT 
200
CAGCCAATTT CAAATGCTTG GATCTGGTTT TGGACCAAAC TATAACATGG 
250
GTTTTGGTCC TCCACATGAA TCCATTTCAA GAACAAGTAG CTGCCATATG 
300
GAACCTGTGG ATACAATGGA GGTTTTGTTG AAGACCGGTG AAGAAACCAG 
350
AGCCGTTGCC TTGAAGAACA AGAGAAAACC AGAGGTTAAG ACAAGGGAAG 
400
AGCAAAAGAC AGAGAAGAAG ATCAAAGTAG AGGCTGAGAC AGAGTCAAGC 
450
ATGAAAGGAA AATCAAACAT GGGAAACACT GAAGCATCTT CAGACACTTC 
500
AAAGGAGACA TCGAAAGGAG CTTCAGAGAA TCAGAAATTA GATTATATCC 
550
ACGTGAGAGC TCGTCGAGGC CAAGCCACTG ACAGACACAG CTTAGCAGAA 
600
AGGGCGAGAA GAGAAAAGAT CAGCAAGAAA ATGAAATATC TGCAAGATAT 
650
TGTGCCTGGA TGCAATAAGG TCACAGGAAA AGCTGGTATG CTTGATGAGA 
700
TCATCAATTA TGTTCAATGT CTCCAAAGAC AAGTCGAGTT CCTGTCGATG 
750
AAACTTGCTG TCTTGAACCC GGAACTAGAG CTTGCCGTGG AAGATGTATC 
800
CGTAAAACAG TTTCAGGCTT ACTTTACAAA TGTAGTTGCT TCAAAGCAAT 
850
CAATAATGGT TGATGTGCCA TTGTTTCCGT TAGACCAGCA AGGATCTCTA 
900
GATTTGTCTG CGATAAACCC GAACCAAACG ACATCTATCG AAGCTCCATC 
950
TGGAAGCTGG GAAACTCAAT CACAGAGTCT CTACAACACA TCTAGCCTCG 
1000
GTTTTCATTA CTAA
1050

>AT2G18300.2 longest ORF length:337
MLEGLVSQES LSLNSMDMSV LERLKWVQQQ QQQLQQVVSH SSNNSPELLQ 
50
ILQFHGSNND ELLESSFSQF QMLGSGFGPN YNMGFGPPHE SISRTSSCHM 
100
EPVDTMEVLL KTGEETRAVA LKNKRKPEVK TREEQKTEKK IKVEAETESS 
150
MKGKSNMGNT EASSDTSKET SKGASENQKL DYIHVRARRG QATDRHSLAE 
200
RARREKISKK MKYLQDIVPG CNKVTGKAGM LDEIINYVQC LQRQVEFLSM 
250
KLAVLNPELE LAVEDVSVKQ FQAYFTNVVA SKQSIMVDVP LFPLDQQGSL 
300
DLSAINPNQT TSIEAPSGSW ETQSQSLYNT SSLGFHY
350