fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G18380 GATA20, HANL1 hanaba taranu like 1, GATA transcription factor 20 (.1)

>AT2G18380.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
EcoRI G|AATTC 450
NheI G|CTAGC 283


Click here to view TAIR data

>AT2G18380.1 length:627
ATGATGGGAT ACCAAACAAA CTCTAATTTC TCCATGTTTT TTTCCTCGGA 
50
AAATGACGAC CAAAACCACC ACAACTACGA TCCTTATAAT AATTTCTCTT 
100
CATCAACTTC TGTTGATTGC ACTCTCTCAC TTGGAACACC CTCTACTCGT 
150
CTCGACGACC ACCATAGATT TTCTTCTGCT AATTCTAACA ACATCTCCGG 
200
CGACTTTTAT ATTCACGGAG GAAACGCTAA GACTTCTTCG TACAAGAAGG 
250
GTGGTGTTGC TCATAGCCTA CCTCGCCGTT GTGCTAGCTG CGACACCACT 
300
TCAACTCCTC TATGGAGAAA CGGACCAAAA GGACCTAAGT CGTTATGTAA 
350
CGCGTGTGGA ATCCGATTCA AGAAAGAGGA GAGGCGTGCG ACGGCCAGAA 
400
ACTTAACGAT CTCCGGTGGA GGTTCATCAG CGGCAGAAGT CCCAGTAGAG 
450
AATTCGTACA ACGGAGGTGG AAACTATTAC AGTCATCATC ATCATCACTA 
500
TGCCTCGTCG TCGCCGTCGT GGGCTCATCA GAACACACAA AGAGTTCCAT 
550
ATTTCTCACC GGTTCCGGAG ATGGAATATC CCTACGTGGA TAACGTCACG 
600
GCTTCTTCTT TTATGTCTTG GAATTGA
650

>AT2G18380.1 longest ORF length:208
MMGYQTNSNF SMFFSSENDD QNHHNYDPYN NFSSSTSVDC TLSLGTPSTR 
50
LDDHHRFSSA NSNNISGDFY IHGGNAKTSS YKKGGVAHSL PRRCASCDTT 
100
STPLWRNGPK GPKSLCNACG IRFKKEERRA TARNLTISGG GSSAAEVPVE 
150
NSYNGGGNYY SHHHHHYASS SPSWAHQNTQ RVPYFSPVPE MEYPYVDNVT 
200
ASSFMSWN
250