Locus |
Common name |
Short description |
AT2G18490 |
|
C2H2-like zinc finger protein (.1) |
>AT2G18490.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
NcoI
| C|CATGG |
170 |
NdeI
| CA|TATG |
559 |
SacI
| GAGCT|C |
599 |
StyI
| C|C[AT][AT]GG |
170 |
Click here to view TAIR data
>AT2G18490.1 length:756
ATGAGGAGAA ACATTGATTA TGTTTCCAGT ACCGATTATT TGCCTATTAA | 50 |
AGATAATCCT CATCTTACTA GAGTTTCTTT CACTCAAACC ATTACTAATA | 100 |
GGTATAGTTC TATTGTTCCT ACCAATTCAC TTGATGCTGT TCAATATGAT | 150 |
ATTGAACTTG TCAAACGTGC CATGGATTCT AAACCCAATA TTTGGAATCC | 200 |
TGTTTTTTAT CCTCCAAATT TTCTTGGTAA ACAATGCGAG ATTTTAAACC | 250 |
CTGAGCCTCT AAATGTCATT TTTCCTCACC AAAATTCTGG AGATCGTCAA | 300 |
TATTTAAACA TGTTTTCCTT GTCATCAAAG CATAACCATG ATCAAAATGT | 350 |
TTTCCATGAA GGCCGATCTT CGACAAAAAT CCCCAAACCA ACCATGTCCA | 400 |
TTGAAAAAAC TACTGAATAT ATAGATTGTG AAGAAAACGA GAAAAGTGAC | 450 |
GATGCTCAAT ATGATGGTCG AATACATAGT TTACCATATA AGAAATATGG | 500 |
TCCATATACA TGTCCTAAGT GCAACAGTAT ATTTGATACT TCTCAAAAAT | 550 |
TTGCTGCACA TATGTCATCT CACTACAAGA GTGAAACGAA TAAAGAAAGA | 600 |
GCTCAAAGAT TTCGTGCAAG AAATAAAAGA AAATATCGTA AATTGAATCT | 650 |
TGAAGTTTAT GGGGAGTCTC AAAAGATTAA ACAAGAAGAT GGGGTCCATA | 700 |
ATGATGGAAG GAGTGACGAC AAACCTATTC AACATCATAA GATTTTATTT | 750 |
CGTTAA | 800 |
>AT2G18490.1 longest ORF length:251
MRRNIDYVSS TDYLPIKDNP HLTRVSFTQT ITNRYSSIVP TNSLDAVQYD | 50 |
IELVKRAMDS KPNIWNPVFY PPNFLGKQCE ILNPEPLNVI FPHQNSGDRQ | 100 |
YLNMFSLSSK HNHDQNVFHE GRSSTKIPKP TMSIEKTTEY IDCEENEKSD | 150 |
DAQYDGRIHS LPYKKYGPYT CPKCNSIFDT SQKFAAHMSS HYKSETNKER | 200 |
AQRFRARNKR KYRKLNLEVY GESQKIKQED GVHNDGRSDD KPIQHHKILF | 250 |
R | 300 |
|