fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G18490 C2H2-like zinc finger protein (.1)

>AT2G18490.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
NcoI C|CATGG 170
NdeI CA|TATG 559
SacI GAGCT|C 599
StyI C|C[AT][AT]GG 170


Click here to view TAIR data

>AT2G18490.1 length:756
ATGAGGAGAA ACATTGATTA TGTTTCCAGT ACCGATTATT TGCCTATTAA 
50
AGATAATCCT CATCTTACTA GAGTTTCTTT CACTCAAACC ATTACTAATA 
100
GGTATAGTTC TATTGTTCCT ACCAATTCAC TTGATGCTGT TCAATATGAT 
150
ATTGAACTTG TCAAACGTGC CATGGATTCT AAACCCAATA TTTGGAATCC 
200
TGTTTTTTAT CCTCCAAATT TTCTTGGTAA ACAATGCGAG ATTTTAAACC 
250
CTGAGCCTCT AAATGTCATT TTTCCTCACC AAAATTCTGG AGATCGTCAA 
300
TATTTAAACA TGTTTTCCTT GTCATCAAAG CATAACCATG ATCAAAATGT 
350
TTTCCATGAA GGCCGATCTT CGACAAAAAT CCCCAAACCA ACCATGTCCA 
400
TTGAAAAAAC TACTGAATAT ATAGATTGTG AAGAAAACGA GAAAAGTGAC 
450
GATGCTCAAT ATGATGGTCG AATACATAGT TTACCATATA AGAAATATGG 
500
TCCATATACA TGTCCTAAGT GCAACAGTAT ATTTGATACT TCTCAAAAAT 
550
TTGCTGCACA TATGTCATCT CACTACAAGA GTGAAACGAA TAAAGAAAGA 
600
GCTCAAAGAT TTCGTGCAAG AAATAAAAGA AAATATCGTA AATTGAATCT 
650
TGAAGTTTAT GGGGAGTCTC AAAAGATTAA ACAAGAAGAT GGGGTCCATA 
700
ATGATGGAAG GAGTGACGAC AAACCTATTC AACATCATAA GATTTTATTT 
750
CGTTAA
800

>AT2G18490.1 longest ORF length:251
MRRNIDYVSS TDYLPIKDNP HLTRVSFTQT ITNRYSSIVP TNSLDAVQYD 
50
IELVKRAMDS KPNIWNPVFY PPNFLGKQCE ILNPEPLNVI FPHQNSGDRQ 
100
YLNMFSLSSK HNHDQNVFHE GRSSTKIPKP TMSIEKTTEY IDCEENEKSD 
150
DAQYDGRIHS LPYKKYGPYT CPKCNSIFDT SQKFAAHMSS HYKSETNKER 
200
AQRFRARNKR KYRKLNLEVY GESQKIKQED GVHNDGRSDD KPIQHHKILF 
250
R
300