fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G19810 AtOZF1 Oxidation-related Zinc Finger 1, CCCH-type zinc finger family protein (.1)

>AT2G19810.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, EcoRI, EcoRV, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 168, 808, 1017
BglII A|GATCT 69
HindIII A|AGCTT 125
NcoI C|CATGG 52
PvuII CAG|CTG 967
StyI C|C[AT][AT]GG 52


Click here to view TAIR data

>AT2G19810.1 length:1080
ATGATGATCG GAGAATCTCA TCGTGGTTTT AATCCAACGG TTCATATTCC 
50
TCCATGGCCA CTTTCTGAAG ATCTAACGGT GTCTGATATT TACGGAAGTC 
100
CAGACGGAGG AAGTAGTATG ATGGAAGCTT TGGCTGAGTT ACAACGTTAT 
150
CTTCCGTCAA ACGAACCGGA TCCGGATTCA GATCCGGATC TCTCGGGTCC 
200
GGATTCACCA ATCGATGCTT ATACATGCGA TCATTTTCGG ATGTATGAGT 
250
TTAAAGTGAG ACGTTGTGCT CGTGGCCGGA GCCATGATTG GACGGAGTGT 
300
CCTTACGCTC ATCCCGGAGA AAAAGCTCGC CGTCGTGATC CGAGGAAGTT 
350
TCATTACTCC GGTACGGCGT GTCCTGAGTT TCGTAAAGGT TGTTGCAAGA 
400
GAGGAGACGC ATGTGAGTTT TCTCATGGTG TTTTTGAGTG TTGGCTTCAC 
450
CCGGCGCGTT ACCGGACTCA GCCGTGTAAA GACGGTGGTA ACTGTCGCCG 
500
TCGTGTTTGT TTCTTTGCTC ATTCGCCGGA TCAGATTAGG GTTTTGCCTA 
550
ATCAAAGCCC TGATCGTGTT GATTCGTTCG ACGTTTTGTC TCCTACGATT 
600
CGTAGAGCGT TTCAGTTTTC GATTTCTCCG TCGTCTAACT CGCCGCCGGT 
650
GAGTCCACGA GGTGACTCGG ACTCGTCGTG TTCGTTACTG AGTCGTTCAC 
700
TCGGGTCTAA TCTGGGAAAC GACGTCGTTG CGTCTCTCAG GAATCTGCAA 
750
CTTAATAAAG TGAAGTCTTC TCTTTCGTCG TCATACAACA ATCAAATCGG 
800
AGGATACGGA TCCGGATTCG GGTCGCCTCG TGGATCGGTT TTGGGTCCTG 
850
GTTTCCGTAG CTTACCAACT ACACCGACCC GACCTGGTTT TATGAACATT 
900
TGGGAGAATG GCTTGGAGGA AGAACCGGCG ATGGAACGGG TCGAGTCGGG 
950
TCGTGAACTG CGAGCGCAGC TGTTCGAGAA GCTGAGCAAA GAGAATTGCA 
1000
TGGGTCGGAT TGAACCGGAT CCGGATCAGG GAGCGGGTGA TACTCCTGAT 
1050
GTCGGGTGGG TCTCTGACTT GGTTATGTGA 
1100

>AT2G19810.1 longest ORF length:359
MMIGESHRGF NPTVHIPPWP LSEDLTVSDI YGSPDGGSSM MEALAELQRY 
50
LPSNEPDPDS DPDLSGPDSP IDAYTCDHFR MYEFKVRRCA RGRSHDWTEC 
100
PYAHPGEKAR RRDPRKFHYS GTACPEFRKG CCKRGDACEF SHGVFECWLH 
150
PARYRTQPCK DGGNCRRRVC FFAHSPDQIR VLPNQSPDRV DSFDVLSPTI 
200
RRAFQFSISP SSNSPPVSPR GDSDSSCSLL SRSLGSNLGN DVVASLRNLQ 
250
LNKVKSSLSS SYNNQIGGYG SGFGSPRGSV LGPGFRSLPT TPTRPGFMNI 
300
WENGLEEEPA MERVESGREL RAQLFEKLSK ENCMGRIEPD PDQGAGDTPD 
350
VGWVSDLVM
400