fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G20280 Zinc finger C-x8-C-x5-C-x3-H type family protein (.1)

>AT2G20280.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BglII, EcoRI, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 261
EcoRV GAT|ATC 484
HindIII A|AGCTT 840, 1059
PstI CTGCA|G 161


Click here to view TAIR data

>AT2G20280.1 length:1116
ATGCCTCCAA AGCAACAACC AAAGGCTGAT TTGGCGAAGA AGCAGAAACA 
50
AGTGGAAGAC AAAACTTTCG GATTGAAAAA CAAGAACAAG AGCAAGAATG 
100
TTCAGAAGTA TGTTCAGAGT CTCAAGCAAT CTGTTCAGCC TAAACCCGAT 
150
GCAACTAAAG CTGCAGCTAA GAAAAAGAAA GAGGAAGAGA AAGCGAGAGA 
200
ACAGGAATTG AATGAGTTGT TCAAGGTAGC TATTAGTCAG CCCAAAGTTC 
250
CTGTAGGTGT GGATCCAAAG TCTATACTCT GTGAGTTTTT CAAGGCCGGG 
300
CAGTGTCAAA AGGGTTTCAA GTGCAAATTC TCTCATGATT TGAACATTCA 
350
AAGGAAGGGT GAGAAGATTG ATATTTACAG TGATACGCGT GATGAAGATG 
400
GAGATATGGA TGAGTGGGAT CAAGAGACCC TTGAAAAGGT TGTTGAATCA 
450
AAGAAAAATG AATATAATCA GAATAAGCCA ACAGATATCG TTTGCAAGTA 
500
TTTTCTGGAT GCTGTGGAAA AGAAACAGTA TGGGTGGTTC TGGTCATGCC 
550
CCAATGGTGG CAAAGAGTGT CATTACAGAC ACGCGCTTCC TCCTGGATAT 
600
GTCCTTAAAT CTCAAATGAA AGCCCTCTTG GAAGAGGAGT CATCGAAGAA 
650
GCTGGCAGTT GAGGACGAAA TCGAAAACGA GCGTGCAAAA CTGCAAACCG 
700
CAACACAAAT GACTCCTGCA CTATTTATGG AATGGAAGAG GAAGAAAATT 
750
GCTGAGAGAG ATGCCGGTTT GGCTGCTTCT CAAGCGGAGA GAGCTAAGAA 
800
CGACCGTATG AGTGGTCGGG AGCTGTTTCT GTCCAATGCA AGCTTGTTTG 
850
TGGATGATGC TGAGGCTTGT GAAGAATACG AGAGGGAAAG AGAGCAGGAA 
900
GAGACTGAAC AAAAGGCAAA GAACAAAGAA GCAGAGGCAG GGACAAGCAA 
950
GAGTAGTGGT GATGCTGAAC AGAGTTCGAA AGAAGTCAAT GAAGAAGAAG 
1000
AAGATGACGA TGATGATGAT GATGACCTAG ACATGGATGA GCTGGATGAA 
1050
TTGGAAGCAA GCTTGTCGAA AACATCGATC CAGATTCGTG AGCCAAACGA 
1100
CGAAGGGTCA TCTTGA
1150

>AT2G20280.1 longest ORF length:371
MPPKQQPKAD LAKKQKQVED KTFGLKNKNK SKNVQKYVQS LKQSVQPKPD 
50
ATKAAAKKKK EEEKAREQEL NELFKVAISQ PKVPVGVDPK SILCEFFKAG 
100
QCQKGFKCKF SHDLNIQRKG EKIDIYSDTR DEDGDMDEWD QETLEKVVES 
150
KKNEYNQNKP TDIVCKYFLD AVEKKQYGWF WSCPNGGKEC HYRHALPPGY 
200
VLKSQMKALL EEESSKKLAV EDEIENERAK LQTATQMTPA LFMEWKRKKI 
250
AERDAGLAAS QAERAKNDRM SGRELFLSNA SLFVDDAEAC EEYEREREQE 
300
ETEQKAKNKE AEAGTSKSSG DAEQSSKEVN EEEEDDDDDD DDLDMDELDE 
350
LEASLSKTSI QIREPNDEGS S
400