fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G20350 Integrase-type DNA-binding superfamily protein (.1)

>AT2G20350.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 309


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>AT2G20350.1 length:477
ATGGAAAATT CAGAAAATGT TCCCTCTTAC GATCAAAACA TCAATTTCAC 
50
TCCTAATTTG ACGAGAGATC AAGAACATGT GATCATGGTC TCTGCTTTGC 
100
AACAAGTAAT ATCCAACGTC GGAGGTGACA CGAACTCGAA TGCATGGGAA 
150
GCTGATCTTC CACCTTTGAA CGCTGGCCCT TGTCCTCTTT GTAGTGTCAC 
200
CGGCTGCTAC GGTTGCGTCT TCCCACGACA CGAGGCGATA ATTAAGAAGG 
250
AGAAGAAGCA CAAAGGAGTG AGGAAAAAAC CATCAGGTAA ATGGGCGGCG 
300
GAGATATGGG ATCCGAGTTT GAAAGTAAGG AGATGGCTTG GAACGTTTCC 
350
AACAGCGGAG ATGGCGGCTA AGGCTTACAA CGATGCGGCG GCTGAGTTTG 
400
TCGGAAGAAG ATCAGCAAGA CGTGGCACAA AGAACGGAGA GGAAGCATCT 
450
ACCAAGAAGA CGACTGAGAA AAATTAA
500

>AT2G20350.1 longest ORF length:158
MENSENVPSY DQNINFTPNL TRDQEHVIMV SALQQVISNV GGDTNSNAWE 
50
ADLPPLNAGP CPLCSVTGCY GCVFPRHEAI IKKEKKHKGV RKKPSGKWAA 
100
EIWDPSLKVR RWLGTFPTAE MAAKAYNDAA AEFVGRRSAR RGTKNGEEAS 
150
TKKTTEKN
200