fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G21530 SMAD/FHA domain-containing protein (.1)

>AT2G21530.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI
Name Recognition sequence Cut positions
BglII A|GATCT 332
StyI C|C[AT][AT]GG 218
XhoI C|TCGAG 29


Click here to view TAIR data

>AT2G21530.1 length:630
ATGGAGATAA CAATATCCCA ATTGTGCTCT CGAGTTAAGT TTTCATCATC 
50
ATCATCATCA TCATCACTTT TCTGTTTCTA TGGAAACAGT AATAGAAACA 
100
ACCTAAATGG AGCTGTTTCA GTAAACTGCT TGAGAGAGAA TGAGCAGATC 
150
AGTAATATTA GCTTCATTGC GAAGAAACCA AGAAGTCATG CACCGGTGGT 
200
GAGAACAACA CGCGCCTCCT TGGATGAGAA TCAATCCCCA ACTTCCGGAG 
250
GAGAACGGTG GCTTCTCAAA CCAGTTGGCG ATGGAGACAC AAGACACATT 
300
GGTTACAAAG TGGCAATGCC TGCTCCTTTT GAGATCTCCT CTGGCCAAGT 
350
TACCATCGGA CGGCTACCGG AAAAGGCTGA CGTCGTGATT CCTGTTGCCA 
400
CCGTGTCAGG AGTCCATGCG ACAATCAATA CGAATGAAAA GAACCTTCTT 
450
GTGACGGATA TGAACAGCAC CAACGGTACA TTCATCGAAG ACAAACGTCT 
500
AATTCCTGGT GTTGCTGCTC CTGCCTTTCC CGGAACACGA ATCACCTTTG 
550
GAGATACAAA TCTAGCAATT TTCCGTGTTT TCAAGCTCCA AGATAGTGAA 
600
GAATCCATAG AGAAACCAAC TACAGAGTAA 
650

>AT2G21530.1 longest ORF length:209
MEITISQLCS RVKFSSSSSS SSLFCFYGNS NRNNLNGAVS VNCLRENEQI 
50
SNISFIAKKP RSHAPVVRTT RASLDENQSP TSGGERWLLK PVGDGDTRHI 
100
GYKVAMPAPF EISSGQVTIG RLPEKADVVI PVATVSGVHA TINTNEKNLL 
150
VTDMNSTNGT FIEDKRLIPG VAAPAFPGTR ITFGDTNLAI FRVFKLQDSE 
200
ESIEKPTTE
250