fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G22300 SR1, CAMTA3 CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 3, signal responsive 1 (.1.2)

>AT2G22300.2 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRV, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
EcoRI G|AATTC 1639
HindIII A|AGCTT 1914, 2470
NcoI C|CATGG 1001, 2891
PvuII CAG|CTG 2372
SacI GAGCT|C 2276
StyI C|C[AT][AT]GG 1001, 1065, 1986, 2891


Click here to view TAIR data

>AT2G22300.2 length:3099
ATGGCGGAAG CAAGACGATT CAGCCCAGTT CATGAATTAG ATGTTGGACA 
50
AATACTCTCA GAAGCACGAC ATCGATGGCT TCGTCCTCCT GAAATCTGTG 
100
AAATTTTACA GAATTACCAA AGATTTCAAA TTTCTACTGA GCCACCTACT 
150
ACACCATCAA GTGGGTCTGT TTTTATGTTT GATCGAAAGG TGCTCAGATA 
200
CTTCAGGAAA GACGGTCACA ATTGGAGGAA GAAAAAAGAT GGAAAGACTG 
250
TGAAGGAAGC TCATGAGAGG TTGAAGGCGG GAAGCGTTGA TGTTCTACAT 
300
TGTTACTATG CGCATGGACA GGACAATGAA AACTTTCAAA GACGCAGTTA 
350
CTGGTTGCTT CAGGAAGAAC TTTCCCACAT AGTTTTTGTT CACTACCTCG 
400
AAGTTAAGGG TAGTAGAGTT TCTACTTCTT TTAACCGGAT GCAAAGGACT 
450
GAAGACGCGG CTCGGTCTCC TCAAGAAACT GGGGACGCCT TGACCAGTGA 
500
ACATGATGGT TATGCTTCTT GCAGCTTCAA TCAAAATGAT CATAGCAATC 
550
ATTCACAAAC TACTGACTCA GCAAGTGTCA ATGGTTTTCA CTCTCCAGAA 
600
CTTGAAGATG CTGAATCAGC ATACAATCAG CATGGAAGTT CCACAGCTTA 
650
CTCTCATCAA GAACTTCAGC AGCCTGCAAC AGGAGGAAAC CTTACTGGTT 
700
TTGATCCTTA CTATCAAATC TCTTTGACGC CCAGGGATAG TTATCAAAAA 
750
GAGCTTCGCA CAATCCCCGT AACTGATTCT TCAATTATGG TAGACAAAAG 
800
CAAAACTATC AACAGTCCTG GAGTAACAAA TGGGTTAAAA AACAGAAAAT 
850
CCATTGATTC CCAAACCTGG GAAGAGATTC TGGGAAATTG TGGTTCTGGA 
900
GTTGAAGCCT TACCTTTGCA GCCTAACAGT GAGCATGAAG TGCTGGACCA 
950
AATACTCGAA AGCTCTTTTA CAATGCAAGA TTTTGCTAGT CTACAAGAGT 
1000
CCATGGTCAA AAGCCAGAAT CAGGAGTTAA ATTCAGGACT TACATCTGAT 
1050
CGTACCGTGT GGTTCCAAGG ACAAGATATG GAGCTAAATG CTATAAGCAA 
1100
TCTAGCTTCG AATGAAAAAG CTCCATATCT ATCTACGATG AAACAACATC 
1150
TGTTACACGG TGCATTGGGC GAAGAAGGTC TGAAAAAGAT GGACAGTTTC 
1200
AATCGCTGGA TGAGCAAAGA ACTTGGAGAT GTTGGTGTTA TAGCTGATGC 
1250
AAACGAGTCC TTTACTCAAT CAAGTTCAAG AACCTACTGG GAAGAAGTTG 
1300
AGAGTGAGGA TGGGTCCAAT GGTCACAACT CTAGGAGGGA CATGGATGGA 
1350
TATGTTATGA GTCCTTCCCT CTCAAAGGAA CAGCTCTTTA GCATCAATGA 
1400
CTTCTCTCCA AGCTGGGCTT ATGTGGGTTG TGAAGTGGTG GTTTTTGTCA 
1450
CTGGAAAATT CTTAAAGACT CGGGAGGAGA CTGAAATTGG CGAGTGGTCT 
1500
TGCATGTTTG GGCAAACAGA AGTTCCAGCA GATGTTATAT CTAATGGTAT 
1550
TCTCCAATGT GTTGCTCCTA TGCATGAGGC TGGAAGAGTT CCCTTTTATG 
1600
TAACATGTTC CAACAGATTG GCATGCAGTG AAGTGCGTGA ATTCGAGTAT 
1650
AAGGTTGCCG AGTCTCAAGT TTTTGATAGA GAAGCAGATG ATGAGTCTAC 
1700
TATTGACATT CTTGAGGCAA GATTTGTTAA ACTGTTGTGC TCGAAATCTG 
1750
AAAATACAAG CCCTGTTTCT GGGAATGACA GTGATTTGTC ACAATTGAGC 
1800
GAGAAGATTA GTTTACTACT TTTCGAGAAC GATGACCAGT TGGATCAGAT 
1850
GCTCATGAAT GAAATCTCCC AAGAAAATAT GAAAAACAAC CTTTTGCAGG 
1900
AATTTCTGAA AGAAAGCTTA CACTCATGGC TTTTACAAAA GATAGCAGAA 
1950
GGTGGAAAAG GTCCAAGTGT TTTGGATGAA GGTGGCCAAG GTGTATTACA 
2000
TTTTGCAGCT TCTCTTGGTT ACAACTGGGC CTTAGAACCA ACAATAATCG 
2050
CTGGTGTAAG CGTTGATTTT CGCGATGTAA ATGGTTGGAC CGCACTTCAT 
2100
TGGGCAGCTT TCTTTGGCAG GGAGAGGATA ATTGGTTCAC TCATAGCTCT 
2150
TGGTGCTGCT CCTGGAACTT TAACTGACCC AAATCCAGAT TTCCCATCAG 
2200
GAAGCACACC TTCTGATCTA GCCTATGCTA ATGGTCACAA AGGAATTGCT 
2250
GGTTATCTCT CAGAATATGC CTTAAGAGCT CATGTTTCTT TGCTCAGTCT 
2300
AAATGATAAA AATGCCGAAA CTGTTGAGAT GGCTCCTAGC CCATCCAGCT 
2350
CATCATTGAC AGACTCGTTG ACAGCTGTAC GTAACGCTAC TCAGGCAGCA 
2400
GCTCGGATTC ATCAGGTTTT CAGGGCTCAG TCTTTCCAGA AGAAGCAACT 
2450
AAAAGAATTT GGAGATAAAA AGCTTGGAAT GTCGGAGGAG CGTGCTCTTT 
2500
CGATGCTTGC TCCTAAAACA CACAAATCAG GAAGGGCACA TAGTGATGAT 
2550
TCCGTGCAAG CCGCTGCTAT TCGGATTCAG AACAAGTTCC GAGGTTACAA 
2600
GGGAAGAAAA GACTATTTGA TTACCAGACA AAGAATCATC AAAATACAGG 
2650
CTCATGTGAG AGGTTATCAG TTTAGGAAAA ACTACAGAAA GATAATTTGG 
2700
TCAGTGGGGG TATTAGAGAA GGTGATATTA CGTTGGAGAC GGAAAGGAGC 
2750
TGGTTTGCGC GGGTTTAAGT CAGAAGCACT TGTTGAGAAG ATGCAAGACG 
2800
GAACAGAGAA AGAAGAAGAT GATGATTTTT TCAAACAAGG AAGAAAGCAA 
2850
ACAGAGGATA GGCTACAAAA AGCTCTTGCA AGAGTGAAAT CCATGGTTCA 
2900
ATATCCTGAA GCTAGAGATC AATACCGTAG ATTGCTAAAT GTTGTCAACG 
2950
ACATCCAAGA AAGCAAGGTT GAAAAAGCTC TTGAAAATTC AGAAGCAACT 
3000
TGTTTTGATG ATGATGATGA TCTGATAGAT ATTGAAGCAT TGTTGGAAGA 
3050
TGATGACACA TTGATGTTGC CTATGTCCTC ATCTTTGTGG ACCAGTTAA
3100

>AT2G22300.2 longest ORF length:1032
MAEARRFSPV HELDVGQILS EARHRWLRPP EICEILQNYQ RFQISTEPPT 
50
TPSSGSVFMF DRKVLRYFRK DGHNWRKKKD GKTVKEAHER LKAGSVDVLH 
100
CYYAHGQDNE NFQRRSYWLL QEELSHIVFV HYLEVKGSRV STSFNRMQRT 
150
EDAARSPQET GDALTSEHDG YASCSFNQND HSNHSQTTDS ASVNGFHSPE 
200
LEDAESAYNQ HGSSTAYSHQ ELQQPATGGN LTGFDPYYQI SLTPRDSYQK 
250
ELRTIPVTDS SIMVDKSKTI NSPGVTNGLK NRKSIDSQTW EEILGNCGSG 
300
VEALPLQPNS EHEVLDQILE SSFTMQDFAS LQESMVKSQN QELNSGLTSD 
350
RTVWFQGQDM ELNAISNLAS NEKAPYLSTM KQHLLHGALG EEGLKKMDSF 
400
NRWMSKELGD VGVIADANES FTQSSSRTYW EEVESEDGSN GHNSRRDMDG 
450
YVMSPSLSKE QLFSINDFSP SWAYVGCEVV VFVTGKFLKT REETEIGEWS 
500
CMFGQTEVPA DVISNGILQC VAPMHEAGRV PFYVTCSNRL ACSEVREFEY 
550
KVAESQVFDR EADDESTIDI LEARFVKLLC SKSENTSPVS GNDSDLSQLS 
600
EKISLLLFEN DDQLDQMLMN EISQENMKNN LLQEFLKESL HSWLLQKIAE 
650
GGKGPSVLDE GGQGVLHFAA SLGYNWALEP TIIAGVSVDF RDVNGWTALH 
700
WAAFFGRERI IGSLIALGAA PGTLTDPNPD FPSGSTPSDL AYANGHKGIA 
750
GYLSEYALRA HVSLLSLNDK NAETVEMAPS PSSSSLTDSL TAVRNATQAA 
800
ARIHQVFRAQ SFQKKQLKEF GDKKLGMSEE RALSMLAPKT HKSGRAHSDD 
850
SVQAAAIRIQ NKFRGYKGRK DYLITRQRII KIQAHVRGYQ FRKNYRKIIW 
900
SVGVLEKVIL RWRRKGAGLR GFKSEALVEK MQDGTEKEED DDFFKQGRKQ 
950
TEDRLQKALA RVKSMVQYPE ARDQYRRLLN VVNDIQESKV EKALENSEAT 
1000
CFDDDDDLID IEALLEDDDT LMLPMSSSLW TS
1050