fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G22670 IAA8 indoleacetic acid-induced protein 8 (.1.2.3.4)

>AT2G22670.3 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, SacI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 445
HindIII A|AGCTT 241
NcoI C|CATGG 853
PvuII CAG|CTG 479, 702
SalI G|TCGAC 643
StyI C|C[AT][AT]GG 485, 714, 853


Click here to view TAIR data

>AT2G22670.3 length:966
ATGTCTTATC GATTGCTAAG TGTGGATAAG GATGAACTGG TTACGTCACC 
50
TTGTTTGAAA GAACGTAACT ACTTGGGTCT CTCTGATTGT TCCTCTGTTG 
100
ATAGCTCAAC TATTCCCAAT GTTGTTGGGA AGAGCAATCT CAATTTCAAA 
150
GCTACTGAAC TGAGGCTAGG TCTTCCTGAG TCTCAATCTC CTGAGAGAGA 
200
GACTGATTTC GGTTTGCTGA GTCCGAGAAC ACCCGATGAG AAGCTTCTCT 
250
TCCCGTTGCT ACCTTCTAAA GACAATGGTT CTGCTACTAC AGGGCATAAG 
300
AATGTTGTTT CTGGTAACAA GAGAGGATTT GCTGACACTT GGGATGAGTT 
350
TTCGGGTGTG AAAGGATCTG TTAGACCTGG AGGAGGAATC AACATGATGT 
400
TGTCGCCGAA AGTTAAGGAT GTCTCGAAGA GTATTCAAGA AGAAAGATCT 
450
CATGCTAAGG GTGGCTTGAA CAATGCACCA GCTGCCAAGG CACAGGTTGT 
500
TGGTTGGCCT CCAATCAGAT CATACCGGAA GAATACAATG GCTTCTTCTA 
550
CTTCGAAGAA CACTGATGAG GTTGATGGGA AACCTGGTCT TGGTGTTCTG 
600
TTTGTGAAGG TGAGCATGGA TGGTGCTCCG TATCTGAGAA AGGTCGACTT 
650
GAGAACTTAC ACTTCCTATC AACAGTTGTC TTCTGCACTT GAGAAAATGT 
700
TCAGCTGCTT CACCCTTGGT CAATGTGGTC TTCATGGTGC TCAAGGGAGG 
750
GAAAGAATGA GCGAGATTAA ACTGAAGGAT CTTCTTCATG GATCAGAATT 
800
TGTGCTTACT TATGAAGATA AAGACGGTGA TTGGATGCTT GTTGGCGATG 
850
TTCCATGGGA GATATTTACT GAAACATGCC AGAAACTGAA GATCATGAAG 
900
GGTTCTGATT CTATTGGCTT AGCTCCAGGT GCAGTGGAGA AATCGAAGAA 
950
CAAAGAGCGG GTTTGA
1000

>AT2G22670.3 longest ORF length:321
MSYRLLSVDK DELVTSPCLK ERNYLGLSDC SSVDSSTIPN VVGKSNLNFK 
50
ATELRLGLPE SQSPERETDF GLLSPRTPDE KLLFPLLPSK DNGSATTGHK 
100
NVVSGNKRGF ADTWDEFSGV KGSVRPGGGI NMMLSPKVKD VSKSIQEERS 
150
HAKGGLNNAP AAKAQVVGWP PIRSYRKNTM ASSTSKNTDE VDGKPGLGVL 
200
FVKVSMDGAP YLRKVDLRTY TSYQQLSSAL EKMFSCFTLG QCGLHGAQGR 
250
ERMSEIKLKD LLHGSEFVLT YEDKDGDWML VGDVPWEIFT ETCQKLKIMK 
300
GSDSIGLAPG AVEKSKNKER V
350