fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G22770 NAI1, bHLH020 basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1)

>AT2G22770.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRV, KpnI, NcoI, NdeI, NotI, PacI, PstI, PvuII, SacI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 607, 797
EcoRI G|AATTC 186
HindIII A|AGCTT 12
HpaI GTT|AAC 355
NheI G|CTAGC 141
SalI G|TCGAC 419
StyI C|C[AT][AT]GG 809


Click here to view TAIR data

>AT2G22770.1 length:963
ATGGATGATT CAAGCTTTAT GGATTTGATG ATCGACACTG ACGAGTATCT 
50
GATCGATGAC TGGGAATCCG ATTTCCCGAT ATGCGGGGAA ACTAACACCA 
100
ACCCCGGTTC CGAGTCTGGA TCTGGAACCG GGTTTGAGTT GCTAGCAGAA 
150
AGACCAACGA AGCAAATGAA AACCAACAAC AACATGAATT CAACATCTTC 
200
TTCTCCGTCG TCTTCTTCTT CTTCTGGTTC TCGCACGTCA CAAGTGATCT 
250
CATTTGGGTC TCCAGACACG AAAACCAACC CGGTCGAGAC ATCTTTGAAC 
300
TTCTCCAACC AAGTAAGCAT GGATCAGAAA GTGGGGTCGA AAAGAAAAGA 
350
TTGTGTTAAC AATGGAGGAA GAAGAGAACC ACATCTATTG AAAGAACATG 
400
TTTTGGCTGA ACGAAAACGT CGACAAAAGC TCAACGAGCG TTTGATTGCT 
450
CTCTCTGCTC TTCTTCCTGG CCTCAAAAAG ACGGACAAGG CAACAGTTCT 
500
TGAAGATGCC ATCAAACATT TGAAACAACT TCAAGAGCGG GTAAAGAAGC 
550
TGGAGGAGGA GCGAGTGGTG ACCAAGAAAA TGGATCAATC AATTATATTG 
600
GTGAAGAGAT CTCAAGTGTA TTTAGATGAT GATTCTTCAT CTTATTCTTC 
650
TACTTGCTCT GCTGCGTCTC CTCTGTCTTC TTCTTCGGAC GAAGTTTCGA 
700
TCTTCAAACA AACAATGCCT ATGATCGAAG CCCGAGTTTC AGACAGAGAT 
750
TTGTTGATTA GAGTCCATTG TGAGAAGAAC AAAGGGTGTA TGATTAAGAT 
800
CTTAAGTTCC TTGGAGAAGT TTCGTCTTGA AGTAGTCAAT AGCTTCACTT 
850
TACCATTTGG AAATTCAACT CTCGTTATAA CCATTCTCAC TAAGATGGAC 
900
AACAAATTTT CTCGACCAGT TGAAGAAGTG GTGAAGAACA TAAGAGTTGC 
950
GTTAGCTGAA TAA
1000

>AT2G22770.1 longest ORF length:320
MDDSSFMDLM IDTDEYLIDD WESDFPICGE TNTNPGSESG SGTGFELLAE 
50
RPTKQMKTNN NMNSTSSSPS SSSSSGSRTS QVISFGSPDT KTNPVETSLN 
100
FSNQVSMDQK VGSKRKDCVN NGGRREPHLL KEHVLAERKR RQKLNERLIA 
150
LSALLPGLKK TDKATVLEDA IKHLKQLQER VKKLEEERVV TKKMDQSIIL 
200
VKRSQVYLDD DSSSYSSTCS AASPLSSSSD EVSIFKQTMP MIEARVSDRD 
250
LLIRVHCEKN KGCMIKILSS LEKFRLEVVN SFTLPFGNST LVITILTKMD 
300
NKFSRPVEEV VKNIRVALAE 
350