| Locus |
Common name |
Short description |
| AT2G22800 |
HAT9 |
Homeobox-leucine zipper protein family (.1) |
>AT2G22800.1 CDS map
>>Show genomic map

Uncut enzymes: Acc65I, AccI, AccIII(BspMII), AclI, AfeI, AflII, AflIII, AgeI, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, ApoI, AscI, AseI, AvrII, BaeI, BalI, BamHI, BanI, BanII, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BglII, BlpI, BmrI, BpmI, BsaAI, BsaBI, BsaI, BsaXI, BseRI, BsgI, BsiEI, BsiHKAI, BsiWI, BslI, BsmAI, BsmBI, BsmFI, BsmI, Bsp1286I, BspDI, BspEI, BspHI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrFI, BsrGI, BsrI, BssHII, BssSI, BstAPI, BstBI, BstF5I, BstXI, BstYI, BstZ17I, Bsu36I, BtrI, BtsI, Cfr10I, ClaI, DraI, DraIII, DrdI, EagI, EarI, EciI, EcoNI, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HaeII, HgaI, HhaI, HinP1I, HpaI, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, NaeI, , NarI, NciI, NcoI, NdeI, NgoMIV, NheI, NotI, NruI, NsiI, PI-PspI, PI-SceI(VDE), PacI, PciI, PflFI, PflMI, PleI, PmeI, PmlI, PshAI, PspOMI, PvuI, RsrII, SacI, SalI, SapI, SbfI, ScaI, SexAI, SfaNI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SphI, SspI, StyI, SwaI, TspRI, Tth111I, XbaI, XcmI, XmaI, XmnI
| Name |
Recognition sequence |
Cut positions |
| AatII
| GACGT|C |
186 |
| AccII(FnuDII)
| CG|CG |
724 |
| AciI
| C|CGC |
723 |
| AluI
| AG|CT |
102, 163, 171, 380, 435, 495, 757, 814 |
| AvaI
| C|PyCGPuG |
106, 132 |
| AvaII
| G|G[AT]CC |
45 |
| BfaI
| C|TAG |
330, 429, 450 |
| BglI
| GCCNNNN|NGGC |
133 |
| BsaHI
| GPu|CGPyC |
186 |
| BsaJI
| C|CNNGG |
143, 152, 725 |
| BsaWI
| [AT]|CCGG[AT] |
160 |
| BsoBI
| C|PyCGPuG |
106, 132 |
| BssKI
| |CCNGG |
487 |
| BstEII
| G|GTNACC |
148, 157 |
| BstNI
| CC|[AT]GG |
487 |
| BstUI
| CG|CG |
724 |
| BtgI
| C|CPuPyGG |
152, 725 |
| Cac8I
| GCN|NGC |
633 |
| DdeI
| C|TNAG |
342, 444, 610 |
| DpnI
| GA-CH3|TC |
137, 389 |
| DpnII
| |GATC |
137, 389 |
| EaeI
| Py|GGCCPu |
749 |
| EcoO109I
| PuG|GNCCPy |
46 |
| Fnu4HI
| GC|NGC |
676, 682, 709, 813 |
| HaeIII
| GG|CC |
447, 748 |
| HincII
| GTPy|PuAC |
117 |
| HindIII
| A|AGCTT |
381 |
| HinfI
| G|ANTC |
119, 202, 258, 440, 581, 608, 641, 670 |
| HpaII
| C|CGG |
159, 263 |
| Hpy188I
| TCN|GA |
82, 182, 572 |
| Hpy99I
| CG[AT]CG| |
112 |
| HpyCH4III
| ACN|GT |
150, 247 |
| HpyCH4IV
| A|CGT |
185 |
| HpyCH4V
| TG|CA |
17, 624, 634, 811 |
| MboI
| |GATC |
137, 389 |
| MseI
| T|TAA |
402 |
| MslI
| CAPyNN|NNPuTG |
311, 628 |
| MspA1I
| C[AC]G|C[GT]G |
198, 436, 714, 725 |
| MspI
| C|CGG |
159, 263 |
| MwoI
| GCNNNNN|NNGC |
133, 682, 756 |
| N.BstNBI
| GAGTCNNNN|N |
207, 263 |
| NlaIII
| CATG| |
15, 305, 622, 628 |
| NlaIV
| GGN|NCC |
46 |
| NspI
| PuCATG|Py |
16, 623, 629 |
| PaeR7I
| C|TCGAG |
106 |
| PpuMI
| PuG|G[AT]CCPy |
46 |
| PsiI
| TTA|TAA |
293 |
| PspGI
| |CC[AT]GG |
487 |
| PstI
| CTGCA|G |
812 |
| PvuII
| CAG|CTG |
436 |
| RsaI
| GT|AC |
75, 744 |
| SacII
| CCGC|GG |
725 |
| Sau3AI
| |GATC |
137, 389 |
| Sau96I
| G|GNCC |
45 |
| ScrFI
| CC|NGG |
487 |
| SfcI
| C|TPuPyAG |
812 |
| SmlI
| C|TPyPuAG |
106, 216, 373 |
| StuI
| AGG|CCT |
448 |
| Taqƒ¿I
| T|CGA |
105, 638 |
| TfiI
| G|A[AT]TC |
440, 581, 670 |
| TliI
| C|TCGAG |
106 |
| TseI
| G|C[AT]GC |
712, 813 |
| Tsp45I
| |GT[CG]AC |
156 |
| Tsp509I
| |AATT |
55, 65, 603 |
| XhoI
| C|TCGAG |
106 |
Click here to view TAIR data
>AT2G22800.1 length:825
ATGGGTTTTG ATGATACATG CAACACAGGT CTTGTTCTTG GATTAGGTCC | 50 |
CTCACCAATT CCAAATAATT ACAATAGTAC CATCAGACAA TCCTCCGTTT | 100 |
ACAAGCTCGA GCCGTCGTTG ACTCTATGCC TCTCGGGCGA TCCCTCGGTT | 150 |
ACCGTGGTGA CCGGAGCTGA CCAGCTATGC CGTCAGACGT CATCTCACAG | 200 |
CGGAGTCTCT TCTTTCTCAA GCGGGAGGGT GGTGAAAAGA GAGAGAGACG | 250 |
GTGGCGAAGA GTCGCCGGAG GAGGAAGAGA TGACGGAGAG AGTTATAAGT | 300 |
GATTACCATG AAGATGAAGA AGGTATTAGT GCTAGAAAAA AACTTAGGCT | 350 |
TACGAAACAA CAATCTGCTC TTCTTGAGGA AAGCTTCAAG GATCATAGCA | 400 |
CCCTTAATCC CAAACAAAAG CAAGTTCTGG CTAGACAGCT GAATCTAAGG | 450 |
CCTAGACAAG TTGAAGTATG GTTTCAAAAT AGAAGAGCCA GGACAAAGCT | 500 |
GAAGCAAACA GAAGTAGATT GTGAGTTTTT GAAGAAGTGT TGTGAAACAT | 550 |
TAGCAGATGA GAACATAAGA CTTCAGAAAG AGATTCAAGA ACTCAAAACC | 600 |
CTAAAATTGA CTCAGCCCTT TTACATGCAC ATGCCTGCAT CGACTCTAAC | 650 |
GAAGTGTCCT TCTTGTGAGA GAATCGGCGG CGGCGGCGGG GGTAATGGAG | 700 |
GAGGAGGTGG CGGCAGCGGG GCTACCGCGG TGATTGTAGA TGGAAGTACG | 750 |
GCCAAAGGAG CTTTCTCTAT CTCCTCAAAG CCTCACTTCT TCAACCCTTT | 800 |
TACTAACCCA TCTGCAGCTT GTTGA | 850 |
>AT2G22800.1 longest ORF length:274
MGFDDTCNTG LVLGLGPSPI PNNYNSTIRQ SSVYKLEPSL TLCLSGDPSV | 50 |
TVVTGADQLC RQTSSHSGVS SFSSGRVVKR ERDGGEESPE EEEMTERVIS | 100 |
DYHEDEEGIS ARKKLRLTKQ QSALLEESFK DHSTLNPKQK QVLARQLNLR | 150 |
PRQVEVWFQN RRARTKLKQT EVDCEFLKKC CETLADENIR LQKEIQELKT | 200 |
LKLTQPFYMH MPASTLTKCP SCERIGGGGG GNGGGGGGSG ATAVIVDGST | 250 |
AKGAFSISSK PHFFNPFTNP SAAC | 300 |
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