fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G22840 ATGRF1 growth-regulating factor 1 (.1)

>AT2G22840.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, EcoRV, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, SacI, SpeI, XbaI
Name Recognition sequence Cut positions
BamHI G|GATCC 585
BglII A|GATCT 217
EcoRI G|AATTC 1006
NcoI C|CATGG 1367
PvuII CAG|CTG 812
SalI G|TCGAC 1452
SmaI CCC|GGG 1315
StyI C|C[AT][AT]GG 1367
XhoI C|TCGAG 636, 926


Click here to view TAIR data

>AT2G22840.1 length:1593
ATGGATCTTG GAGTTCGTGT TTCTGGTCAT GAAACCGTTT CTTCTCCGGG 
50
TCAAACTGAA CTCGGATCTG GTTTCAGTAA CAAGCAAGAA AGATCCGGTT 
100
TCGATGGTGA AGATTGCTGG AGAAGTTCAA AGCTCTCACG AACATCAACT 
150
GATGGATTCT CTTCTTCCCC TGCCTCTGCT AAAACGCTGT CGTTTCATCA 
200
AGGCATCCCT TTACTGAGAT CTACCACTAT TAATGATCCT CGTAAAGGAC 
250
AAGAACACAT GCTTAGCTTC TCTTCTGCTT CAGGCAAATC AGATGTCTCA 
300
CCTTATCTTC AGTACTGTAG AAACTCAGGA TATGGTTTAG GAGGAATGAT 
350
GAACACAAGC AACATGCATG GAAACTTGTT GACAGGAGTA AAAGGACCTT 
400
TTTCATTGAC TCAGTGGGCA GAGCTAGAGC AACAGGCGTT GATCTATAAG 
450
TATATCACAG CCAATGTCCC TGTTCCATCT AGTTTACTTC TCTCTCTCAA 
500
GAAATCTTTT TTCCCTTATG GTTCCTTGCC TCCTAATTCT TTTGGATGGG 
550
GCTCTTTTCA TCTGGGCTTT TCCGGTGGTA ACATGGATCC CGAGCCAGGG 
600
AGATGTCGCC GGACAGATGG AAAGAAATGG CGGTGCTCGA GGGACGCTGT 
650
TCCCGATCAA AAGTACTGTG AACGACATAT TAACAGAGGC CGCCATCGTT 
700
CAAGAAAGCC TGTGGAAGGC CAAAATGGCC ACAATACTAA TGCTGCCGCC 
750
GCTGCTTCTG CTGCTGCCGC TTCTACCGCT GCTGCTGTGT CCAAAGCGGC 
800
AGCGGGGACT TCAGCTGTTG CGATGCGTGG ATCAGATAAT AACAATAGCC 
850
TTGCCGCTGC TGTTGGAACA CAACATCATA CCAATAATCA ATCTACAGAT 
900
TCTTTGGCTA ACAGAGTTCA AAATTCTCGA GGGGCTTCGG TTTTTCCTGC 
950
CACGATGAAC TTACAGTCGA AGGAAACTCA TCCGAAACAA AGCAATAATC 
1000
CCTTTGAATT CGGACTCATC TCTTCTGATT CGTTACTTAA TCCGTCGCAT 
1050
AAACAAGCCT CGTATGCAAC CTCTTCCAAA GGCTTTGGAT CGTATCTTGA 
1100
CTTCGGCAAC CAAGCCAAGC ACGCGGGGAA TCACAACAAT GTCGATTCTT 
1150
GGCCCGAAGA GCTGAAATCG GATTGGACTC AGCTCTCAAT GTCAATCCCT 
1200
ATGGCTCCAT CTTCCCCTGT TCAAGATAAA CTTGCACTCT CACCTTTAAG 
1250
GTTATCGCGT GAGTTTGACC CCGCGATCCA CATGGGATTA GGCGTCAACA 
1300
CCGAGTTTCT TGACCCCGGG AAAAAGACGA ATAACTGGAT ACCAATCTCC 
1350
TGGGGTAATA ACAACTCCAT GGGAGGTCCA CTCGGCGAGG TACTAAACAG 
1400
CACGACCAAT AGTCCCAAGT TTGGTTCCTC TCCAACAGGC GTCTTGCAAA 
1450
AGTCGACATT TGGTTCTCTT TCTAACAGCA GCTCGGCAAG CAGCACCATC 
1500
ATTGGCGATA ACAACAATAA GAACGGTGAT GGAAAAGATC CGCTTGGCCC 
1550
GACCACGCTG ATGAATACTT CTGCTACTGC TCCTTCTCTG TGA
1600

>AT2G22840.1 longest ORF length:530
MDLGVRVSGH ETVSSPGQTE LGSGFSNKQE RSGFDGEDCW RSSKLSRTST 
50
DGFSSSPASA KTLSFHQGIP LLRSTTINDP RKGQEHMLSF SSASGKSDVS 
100
PYLQYCRNSG YGLGGMMNTS NMHGNLLTGV KGPFSLTQWA ELEQQALIYK 
150
YITANVPVPS SLLLSLKKSF FPYGSLPPNS FGWGSFHLGF SGGNMDPEPG 
200
RCRRTDGKKW RCSRDAVPDQ KYCERHINRG RHRSRKPVEG QNGHNTNAAA 
250
AASAAAASTA AAVSKAAAGT SAVAMRGSDN NNSLAAAVGT QHHTNNQSTD 
300
SLANRVQNSR GASVFPATMN LQSKETHPKQ SNNPFEFGLI SSDSLLNPSH 
350
KQASYATSSK GFGSYLDFGN QAKHAGNHNN VDSWPEELKS DWTQLSMSIP 
400
MAPSSPVQDK LALSPLRLSR EFDPAIHMGL GVNTEFLDPG KKTNNWIPIS 
450
WGNNNSMGGP LGEVLNSTTN SPKFGSSPTG VLQKSTFGSL SNSSSASSTI 
500
IGDNNNKNGD GKDPLGPTTL MNTSATAPSL 
550