fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G24260 LRL1, bHLH066 LJRHL1-like 1 (.1)

>AT2G24260.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 658
NcoI C|CATGG 683
SalI G|TCGAC 175, 942
StyI C|C[AT][AT]GG 683


Click here to view TAIR data

>AT2G24260.1 length:1053
ATGATGAACT CTTCTCTTCT AACTCCTTCT TCTTCATCTT CTTCCCATAT 
50
CCAAACTCCA TCAACAACTT TCGACCACGA AGACTTCCTC GATCAAATCT 
100
TTTCCTCGGC CCCGTGGCCC TCCGTCGTCG ATGATGCTCA TCCTCTTCCC 
150
TCCGATGGCT TCCACGGCCA CGATGTCGAC TCAAGGAATC AGCCGATCAT 
200
GATGATGCCT TTGAATGATG GCTCCTCCGT CCACGCTCTT TATAATGGCT 
250
TCTCCGTCGC CGGATCTCTT CCTAACTTTC AAATCCCTCA GGGATCGGGA 
300
GGAGGATTGA TGAACCAACA AGGACAAACG CAAACGCAAA CGCAACCTCA 
350
GGCGAGCGCG TCTACAGCTA CTGGTGGTAC GGTGGCGGCT CCGCCGCAGA 
400
GTAGGACTAA AATCCGAGCT AGGAGAGGTC AAGCAACTGA TCCTCATAGT 
450
ATCGCCGAAA GGTTACGAAG AGAGAGAATT GCGGAAAGAA TGAAAGCTCT 
500
TCAAGAACTC GTTCCTAACG GCAATAAGAC AGACAAGGCA TCGATGCTCG 
550
ATGAGATCAT AGATTATGTC AAGTTTTTAC AACTCCAAGT CAAGGTACTG 
600
AGCATGAGCA GATTGGGAGG TGCTGCTTCC GTTTCTTCTC AAATCTCCGA 
650
GGCTGGTGGA TCCCACGGGA ACGCATCCTC CGCCATGGTC GGCGGTAGCC 
700
AGACGGCCGG AAACTCCAAC GACAGCGTTA CAATGACGGA ACATCAAGTG 
750
GCCAAACTAA TGGAAGAAGA CATGGGCTCG GCCATGCAAT ATCTTCAAGG 
800
GAAAGGTCTT TGTCTCATGC CAATCTCTTT AGCCACCGCC ATCTCAACCG 
850
CCACGTGTCA CTCCCGTAAC CCTTTGATCC CTGGAGCTGT TGCCGACGTC 
900
GGAGGTCCTT CCCCTCCCAA TCTTTCTGGC ATGACCATAC AGTCGACGAG 
950
TACAAAAATG GGTAGCGGTA ATGGGAAATT AAACGGTAAC GGCGTGACCG 
1000
AGAGGTCGTC TTCTATCGCC GTTAAAGAGG CCGTATCCGT TTCGAAAGCG 
1050
TGA
1100

>AT2G24260.1 longest ORF length:350
MMNSSLLTPS SSSSSHIQTP STTFDHEDFL DQIFSSAPWP SVVDDAHPLP 
50
SDGFHGHDVD SRNQPIMMMP LNDGSSVHAL YNGFSVAGSL PNFQIPQGSG 
100
GGLMNQQGQT QTQTQPQASA STATGGTVAA PPQSRTKIRA RRGQATDPHS 
150
IAERLRRERI AERMKALQEL VPNGNKTDKA SMLDEIIDYV KFLQLQVKVL 
200
SMSRLGGAAS VSSQISEAGG SHGNASSAMV GGSQTAGNSN DSVTMTEHQV 
250
AKLMEEDMGS AMQYLQGKGL CLMPISLATA ISTATCHSRN PLIPGAVADV 
300
GGPSPPNLSG MTIQSTSTKM GSGNGKLNGN GVTERSSSIA VKEAVSVSKA 
350