fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G24430 ANAC039, ANAC038 Arabidopsis NAC domain containing protein 39, NAC domain containing protein 38 (.1.2)

>AT2G24430.2 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
HindIII A|AGCTT 41
NcoI C|CATGG 172, 737
SacI GAGCT|C 380, 700
StyI C|C[AT][AT]GG 172, 737, 804


Click here to view TAIR data

>AT2G24430.2 length:951
ATGGAACAAG GAGATCATCA GCAGCATAAG AAAGAAGAAG AAGCTTTGCC 
50
ACCGGGTTTC AGATTTCATC CGACGGATGA GGAGCTAATC TCATATTACT 
100
TGGTTAATAA GATTGCCGAT CAAAACTTCA CCGGGAAAGC AATCGCTGAC 
150
GTTGATCTTA ACAAGTCCGA GCCATGGGAG CTTCCTGAGA AGGCGAAAAT 
200
GGGAGGAAAA GAATGGTACT TTTTTAGCCT CCGGGACCGG AAGTACCCGA 
250
CGGGAGTGAG GACGAATAGG GCGACGAATA CAGGATATTG GAAAACCACA 
300
GGAAAAGACA AAGAGATATT CAATAGCACA ACCTCGGAGT TGGTCGGGAT 
350
GAAGAAGACT TTGGTCTTTT ACAGAGGACG AGCTCCTCGT GGGGAGAAGA 
400
CTTGTTGGGT CATGCATGAG TATCGACTTC ACTCCAAGTC CTCATATAGA 
450
ACCTCCAAGC AAGACGAGTG GGTAGTGTGT AGAGTGTTCA AGAAAACAGA 
500
AGCAACCAAG AAATACATAA GCACCAGTAG CAGCAGCACA AGTCATCACC 
550
ACAACAACCA CACAAGAGCC TCAATACTAT CAACCAACAA CAATAATCCT 
600
AATTACTCAT CAGACCTCCT TCAACTCCCA CCGCATCTAC AACCACACCC 
650
GAGCCTCAAT ATTAACCAAT CCCTCATGGC AAACGCCGTT CACCTAGCTG 
700
AGCTCTCAAG AGTCTTCCGT GCCTCTACAA GCACCACCAT GGACTCTTCT 
750
CATCAGCAGC TAATGAACTA CACCCACATG CCTGTCTCAG GGCTCAACCT 
800
CAACCTTGGC GGTGCACTGG TCCAGCCGCC TCCTGTTGTG TCTCTTGAGG 
850
ATGTTGCCGC GGTTAGTGCT TCGTACAATG GCGAAAACGG GTTTGGAAAT 
900
GTGGAGATGA GCCAGTGCAT GGACTTGGAT GGATACTGGC CATCTTATTG 
950
A
1000

>AT2G24430.2 longest ORF length:316
MEQGDHQQHK KEEEALPPGF RFHPTDEELI SYYLVNKIAD QNFTGKAIAD 
50
VDLNKSEPWE LPEKAKMGGK EWYFFSLRDR KYPTGVRTNR ATNTGYWKTT 
100
GKDKEIFNST TSELVGMKKT LVFYRGRAPR GEKTCWVMHE YRLHSKSSYR 
150
TSKQDEWVVC RVFKKTEATK KYISTSSSST SHHHNNHTRA SILSTNNNNP 
200
NYSSDLLQLP PHLQPHPSLN INQSLMANAV HLAELSRVFR ASTSTTMDSS 
250
HQQLMNYTHM PVSGLNLNLG GALVQPPPVV SLEDVAAVSA SYNGENGFGN 
300
VEMSQCMDLD GYWPSY
350