Locus |
Common name |
Short description |
AT2G24790 |
COL3, ATCOL3 |
CONSTANS-like 3 (.1.2) |
>AT2G24790.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
EcoRV
| GAT|ATC |
229 |
HindIII
| A|AGCTT |
764 |
PvuII
| CAG|CTG |
659 |
Click here to view TAIR data
>AT2G24790.1 length:885
ATGGCGTCGT CGTCAAGACT TTGCGATTCG TGCAAATCGA CGGCAGCAAC | 50 |
TCTATTCTGC CGCGCAGACG CCGCGTTTCT CTGCGGCGAC TGCGACGGTA | 100 |
AGATCCACAC AGCTAACAAA CTCGCATCAC GTCACGAACG AGTTTGGCTA | 150 |
TGTGAAGTAT GCGAACAAGC ACCAGCACAC GTCACGTGCA AAGCTGACGC | 200 |
CGCTGCGTTA TGCGTCACGT GCGACCGTGA TATCCACTCA GCTAATCCAC | 250 |
TCTCTCGCCG CCACGAGCGC GTACCAATCA CTCCTTTCTA CGACGCTGTA | 300 |
GGTCCAGCAA AATCCGCTTC CTCCTCCGTC AATTTCGTAG ATGAAGATGG | 350 |
CGGTGACGTC ACTGCTTCGT GGCTTTTAGC TAAAGAAGGA ATCGAAATCA | 400 |
CTAATTTGTT CTCCGATCTT GATTATCCGA AGATTGAGGT AACGTCGGAG | 450 |
GAGAATAGCT CCGGTAACGA CGGAGTTGTT CCTGTGCAGA ATAAGTTGTT | 500 |
TCTTAACGAA GATTACTTCA ATTTCGATCT CTCTGCTTCC AAAATTTCTC | 550 |
AACAAGGATT CAATTTCATC AACCAAACTG TTTCGACGAG AACGATAGAT | 600 |
GTACCGTTGG TGCCTGAAAG TGGAGGAGTG ACGGCGGAGA TGACGAACAC | 650 |
GGAGACGCCA GCTGTGCAGT TATCACCGGC GGAGAGGGAA GCAAGGGTTT | 700 |
TGAGGTATAG AGAGAAGAGG AAGAATCGGA AATTTGAGAA GACGATTAGG | 750 |
TATGCGTCGC GTAAAGCTTA CGCTGAGATG AGGCCGAGAA TCAAAGGACG | 800 |
TTTTGCTAAG AGAACAGATT CGAGAGAGAA TGATGGTGGA GACGTCGGAG | 850 |
TTTATGGCGG ATTCGGTGTT GTTCCGAGTT TCTGA | 900 |
>AT2G24790.1 longest ORF length:294
MASSSRLCDS CKSTAATLFC RADAAFLCGD CDGKIHTANK LASRHERVWL | 50 |
CEVCEQAPAH VTCKADAAAL CVTCDRDIHS ANPLSRRHER VPITPFYDAV | 100 |
GPAKSASSSV NFVDEDGGDV TASWLLAKEG IEITNLFSDL DYPKIEVTSE | 150 |
ENSSGNDGVV PVQNKLFLNE DYFNFDLSAS KISQQGFNFI NQTVSTRTID | 200 |
VPLVPESGGV TAEMTNTETP AVQLSPAERE ARVLRYREKR KNRKFEKTIR | 250 |
YASRKAYAEM RPRIKGRFAK RTDSRENDGG DVGVYGGFGV VPSF | 300 |
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