fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G24790 COL3, ATCOL3 CONSTANS-like 3 (.1.2)

>AT2G24790.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
EcoRV GAT|ATC 229
HindIII A|AGCTT 764
PvuII CAG|CTG 659


Click here to view TAIR data

>AT2G24790.1 length:885
ATGGCGTCGT CGTCAAGACT TTGCGATTCG TGCAAATCGA CGGCAGCAAC 
50
TCTATTCTGC CGCGCAGACG CCGCGTTTCT CTGCGGCGAC TGCGACGGTA 
100
AGATCCACAC AGCTAACAAA CTCGCATCAC GTCACGAACG AGTTTGGCTA 
150
TGTGAAGTAT GCGAACAAGC ACCAGCACAC GTCACGTGCA AAGCTGACGC 
200
CGCTGCGTTA TGCGTCACGT GCGACCGTGA TATCCACTCA GCTAATCCAC 
250
TCTCTCGCCG CCACGAGCGC GTACCAATCA CTCCTTTCTA CGACGCTGTA 
300
GGTCCAGCAA AATCCGCTTC CTCCTCCGTC AATTTCGTAG ATGAAGATGG 
350
CGGTGACGTC ACTGCTTCGT GGCTTTTAGC TAAAGAAGGA ATCGAAATCA 
400
CTAATTTGTT CTCCGATCTT GATTATCCGA AGATTGAGGT AACGTCGGAG 
450
GAGAATAGCT CCGGTAACGA CGGAGTTGTT CCTGTGCAGA ATAAGTTGTT 
500
TCTTAACGAA GATTACTTCA ATTTCGATCT CTCTGCTTCC AAAATTTCTC 
550
AACAAGGATT CAATTTCATC AACCAAACTG TTTCGACGAG AACGATAGAT 
600
GTACCGTTGG TGCCTGAAAG TGGAGGAGTG ACGGCGGAGA TGACGAACAC 
650
GGAGACGCCA GCTGTGCAGT TATCACCGGC GGAGAGGGAA GCAAGGGTTT 
700
TGAGGTATAG AGAGAAGAGG AAGAATCGGA AATTTGAGAA GACGATTAGG 
750
TATGCGTCGC GTAAAGCTTA CGCTGAGATG AGGCCGAGAA TCAAAGGACG 
800
TTTTGCTAAG AGAACAGATT CGAGAGAGAA TGATGGTGGA GACGTCGGAG 
850
TTTATGGCGG ATTCGGTGTT GTTCCGAGTT TCTGA
900

>AT2G24790.1 longest ORF length:294
MASSSRLCDS CKSTAATLFC RADAAFLCGD CDGKIHTANK LASRHERVWL 
50
CEVCEQAPAH VTCKADAAAL CVTCDRDIHS ANPLSRRHER VPITPFYDAV 
100
GPAKSASSSV NFVDEDGGDV TASWLLAKEG IEITNLFSDL DYPKIEVTSE 
150
ENSSGNDGVV PVQNKLFLNE DYFNFDLSAS KISQQGFNFI NQTVSTRTID 
200
VPLVPESGGV TAEMTNTETP AVQLSPAERE ARVLRYREKR KNRKFEKTIR 
250
YASRKAYAEM RPRIKGRFAK RTDSRENDGG DVGVYGGFGV VPSF
300