fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G24790 COL3, ATCOL3 CONSTANS-like 3 (.1.2)

>AT2G24790.2 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 631, 637
EcoRV GAT|ATC 229
HindIII A|AGCTT 604
NcoI C|CATGG 610
StyI C|C[AT][AT]GG 610
XbaI T|CTAGA 634


Click here to view TAIR data

>AT2G24790.2 length:663
ATGGCGTCGT CGTCAAGACT TTGCGATTCG TGCAAATCGA CGGCAGCAAC 
50
TCTATTCTGC CGCGCAGACG CCGCGTTTCT CTGCGGCGAC TGCGACGGTA 
100
AGATCCACAC AGCTAACAAA CTCGCATCAC GTCACGAACG AGTTTGGCTA 
150
TGTGAAGTAT GCGAACAAGC ACCAGCACAC GTCACGTGCA AAGCTGACGC 
200
CGCTGCGTTA TGCGTCACGT GCGACCGTGA TATCCACTCA GCTAATCCAC 
250
TCTCTCGCCG CCACGAGCGC GTACCAATCA CTCCTTTCTA CGACGCTGTA 
300
GGTCCAGCAA AATCCGCTTC CTCCTCCGTC AATTTCGTAG ATGAAGATGG 
350
CGGTGACGTC ACTGCTTCGT GGCTTTTAGC TAAAGAAGGA ATCGAAATCA 
400
CTAATTTGTT CTCCGATCTT GATTATCCGA AGATTGAGGT AACGTCGGAG 
450
GAGAATAGCT CCGGTAACGA CGGAGTTGTT CCTGTGCAGA ATAAGTTGTT 
500
TCTTAACGAA GATTACTTCA ATTTCGATCT CTCTGCTTCC AAAATTTCTC 
550
AACAAGGATT CAATTTCATC AACCAAACTG TACGAATCTC TCTCTATCTT 
600
CTTAAGCTTC CATGGATCTG GAAAATTTTC AGATCTAGAT CTGAAAGTTT 
650
GGATCTGATT TGA
700

>AT2G24790.2 longest ORF length:220
MASSSRLCDS CKSTAATLFC RADAAFLCGD CDGKIHTANK LASRHERVWL 
50
CEVCEQAPAH VTCKADAAAL CVTCDRDIHS ANPLSRRHER VPITPFYDAV 
100
GPAKSASSSV NFVDEDGGDV TASWLLAKEG IEITNLFSDL DYPKIEVTSE 
150
ENSSGNDGVV PVQNKLFLNE DYFNFDLSAS KISQQGFNFI NQTVRISLYL 
200
LKLPWIWKIF RSRSESLDLI 
250