fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G25900 ATTZF1, ATCTH A. THALIANA TANDEM ZINC FINGER PROTEIN 1, Zinc finger C-x8-C-x5-C-x3-H type family protein (.1.2)

>AT2G25900.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HindIII, KpnI, NcoI, NdeI, NheI, NotI, PacI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI
Name Recognition sequence Cut positions
BglII A|GATCT 600, 772
HpaI GTT|AAC 121, 198
PstI CTGCA|G 776
XhoI C|TCGAG 305


Click here to view TAIR data

>AT2G25900.1 length:948
ATGATGATCG GCGAAAATAA AAACCGGCCA CATCCAACGA TCCATATCCC 
50
TCAATGGGAT CAAATCAACG ATCCAACGGC CACAATCTCT TCACCATTCT 
100
CTTCCGTCAA CCTTAACAGC GTTAACGACT ACCCACACTC TCCGTCACCG 
150
TATCTCGACT CCTTCGCTTC TCTCTTCCGT TACCTCCCGT CAAACGAGTT 
200
AACAAACGAT TCAGACTCAT CAAGTGGCGA CGAGTCATCA CCACTCACCG 
250
ACTCATTCTC CTCCGACGAG TTTCGCATCT ACGAGTTCAA AATCCGGCGA 
300
TGCGCTCGAG GTCGATCTCA TGATTGGACG GAGTGTCCGT TCGCACATCC 
350
CGGAGAAAAA GCTCGACGAC GTGATCCGAG AAAGTTTCAT TACTCCGGCA 
400
CCGCTTGTCC TGAGTTTCGT AAAGGAAGTT GTAGAAGAGG TGATTCGTGT 
450
GAGTTCTCTC ATGGAGTTTT CGAGTGTTGG CTCCATCCTT CTCGTTACCG 
500
TACTCAGCCG TGTAAAGACG GAACTAGCTG CCGGAGAAGA ATCTGTTTCT 
550
TCGCTCATAC GACGGAGCAG TTACGTGTAT TACCTTGTTC GTTAGATCCA 
600
GATCTTGGAT TCTTCTCAGG ATTAGCTACT TCTCCGACTT CGATTCTTGT 
650
TTCTCCTTCG TTTTCACCAC CGTCGGAATC TCCGCCGCTT TCTCCGAGTA 
700
CCGGTGAACT TATTGCGTCG ATGAGGAAAA TGCAATTGAA CGGAGGTGGT 
750
TGTTCGTGGA GTTCTCCGAT GAGATCTGCA GTTAGGTTAC CTTTTTCGTC 
800
GTCTCTGCGT CCGATTCAGG CGGCAACGTG GCCGAGGATA AGAGAGTTTG 
850
AGATCGAAGA AGCTCCGGCG ATGGAATTTG TGGAATCTGG GAAAGAGCTG 
900
AGAGCGGAGA TGTATGCAAG ACTCAGTAGA GAGAACTCAC TCGGTTGA
950

>AT2G25900.1 longest ORF length:315
MMIGENKNRP HPTIHIPQWD QINDPTATIS SPFSSVNLNS VNDYPHSPSP 
50
YLDSFASLFR YLPSNELTND SDSSSGDESS PLTDSFSSDE FRIYEFKIRR 
100
CARGRSHDWT ECPFAHPGEK ARRRDPRKFH YSGTACPEFR KGSCRRGDSC 
150
EFSHGVFECW LHPSRYRTQP CKDGTSCRRR ICFFAHTTEQ LRVLPCSLDP 
200
DLGFFSGLAT SPTSILVSPS FSPPSESPPL SPSTGELIAS MRKMQLNGGG 
250
CSWSSPMRSA VRLPFSSSLR PIQAATWPRI REFEIEEAPA MEFVESGKEL 
300
RAEMYARLSR ENSLG
350