Locus |
Common name |
Short description |
AT2G26150 |
ATHSFA2 |
heat shock transcription factor A2 (.1.2) |
>AT2G26150.1 CDS map
>>Show genomic map

Uncut enzymes: AatII, Acc65I, AccI, AccII(FnuDII), AccIII(BspMII), AciI, AclI, AfeI, AflII, AflIII, AgeI, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AseI, AvaI, AvaII, AvrII, BaeI, BalI, BanI, BanII, BbsI, BbvCI, BbvI, BcgI, BciVI, BglI, BlpI, BmrI, BpmI, BsaAI, BsaBI, BsaHI, BsaI, BsaWI, BsaXI, BseRI, BsgI, BsiEI, BsiHKAI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BsoBI, Bsp1286I, BspEI, BspHI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrFI, BsrGI, BssHII, BssKI, BssSI, BstBI, BstEII, BstNI, BstUI, BstZ17I, Bsu36I, BtgI, BtrI, BtsI, Cac8I, Cfr10I, DraI, DraIII, DrdI, EaeI, EagI, EarI, EciI, EcoO109I, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HaeII, HgaI, HhaI, HinP1I, HincII, HpaI, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, MslI, MspA1I, NaeI, , NarI, NciI, NcoI, NdeI, NgoMIV, NheI, NotI, NruI, NsiI, NspI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspGI, PspOMI, PvuI, PvuII, RsaI, RsrII, SacI, SacII, SalI, SapI, SbfI, ScaI, ScrFI, SexAI, SfaNI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SphI, SspI, StuI, SwaI, TliI, TspRI, Tth111I, XbaI, XcmI, XhoI, XmaI, XmnI
Name |
Recognition sequence |
Cut positions |
AluI
| AG|CT |
206, 294, 520, 554, 574, 749 |
ApoI
| Pu|AATTPy |
340, 771 |
BamHI
| G|GATCC |
76 |
BclI
| T|GATCA |
783, 1005 |
BfaI
| C|TAG |
90 |
BglII
| A|GATCT |
987 |
BsaJI
| C|CNNGG |
638 |
BslI
| CCNNNNN|NNGG |
102, 638, 753 |
BspDI
| AT|CGAT |
838 |
BsrI
| ACTGGN| |
46 |
BstAPI
| GCANNNN|NTGC |
590 |
BstF5I
| GGATGNN| |
444, 715, 808, 937 |
BstXI
| CCANNNNN|NTGG |
334 |
BstYI
| Pu|GATCPy |
76, 162, 436, 987 |
ClaI
| AT|CGAT |
838 |
DdeI
| C|TNAG |
139, 523, 601, 868 |
DpnI
| GA-CH3|TC |
75, 161, 323, 435, 503, 782, 986, 1004 |
DpnII
| |GATC |
75, 161, 323, 435, 503, 782, 986, 1004 |
EcoNI
| CCTNN|NNNAGG |
638 |
Fnu4HI
| GC|NGC |
57, 573, 614, 828, 927 |
HaeIII
| GG|CC |
120 |
HindIII
| A|AGCTT |
750 |
HinfI
| G|ANTC |
222, 310, 425, 563 |
HpaII
| C|CGG |
164 |
Hpy188I
| TCN|GA |
134, 313, 653, 1026 |
Hpy99I
| CG[AT]CG| |
169, 476 |
HpyCH4III
| ACN|GT |
33, 128, 177, 469, 587 |
HpyCH4IV
| A|CGT |
38, 253, 626 |
HpyCH4V
| TG|CA |
343, 414, 571, 829 |
MboI
| |GATC |
75, 161, 323, 435, 503, 782, 986, 1004 |
MseI
| T|TAA |
108, 1033 |
MspI
| C|CGG |
164 |
MwoI
| GCNNNNN|NNGC |
590 |
N.BstNBI
| GAGTCNNNN|N |
568 |
NlaIII
| CATG| |
406, 447, 506, 779, 992, 997 |
NlaIV
| GGN|NCC |
76, 1029 |
PstI
| CTGCA|G |
830 |
Sau3AI
| |GATC |
75, 161, 323, 435, 503, 782, 986, 1004 |
Sau96I
| G|GNCC |
120 |
SfcI
| C|TPuPyAG |
53, 71, 830 |
SmlI
| C|TPyPuAG |
279 |
StyI
| C|C[AT][AT]GG |
638 |
Taqƒ¿I
| T|CGA |
474, 837, 857 |
TfiI
| G|A[AT]TC |
222, 310, 425 |
TseI
| G|C[AT]GC |
573, 614, 828, 927 |
Tsp45I
| |GT[CG]AC |
36 |
Tsp509I
| |AATT |
272, 339, 770, 854, 917 |
Click here to view TAIR data
>AT2G26150.1 length:1038
ATGGAAGAAC TGAAAGTGGA AATGGAGGAA GAAACGGTGA CGTTTACTGG | 50 |
TTCTGTAGCG GCTTCTTCAT CTGTAGGATC CTCTTCCTCT CCTAGACCAA | 100 |
TGGAAGGGCT TAACGAAACA GGGCCACCAC CGTTTCTGAC TAAGACTTAC | 150 |
GAAATGGTGG AAGATCCGGC GACGGACACG GTGGTTTCTT GGAGTAATGG | 200 |
TCGTAACAGC TTTGTGGTGT GGGATTCTCA TAAGTTCTCA ACAACTCTCC | 250 |
TTCCACGTTA CTTCAAGCAT AGCAATTTCT CAAGTTTTAT TCGTCAGCTC | 300 |
AATACTTATG GATTCAGAAA GATTGATCCA GATAGATGGG AATTTGCAAA | 350 |
TGAAGGGTTT TTAGCAGGAC AAAAGCATCT CTTGAAGAAC ATCAAAAGAA | 400 |
GGAGGAACAT GGGTTTGCAG AATGTGAATC AGCAAGGATC TGGGATGTCA | 450 |
TGTGTTGAGG TTGGGCAATA CGGTTTCGAC GGGGAGGTTG AGAGGTTGAA | 500 |
GAGGGATCAT GGTGTGCTTG TAGCTGAGGT AGTTAGGTTG AGGCAACAGC | 550 |
AACACAGCTC CAAGAGTCAA GTTGCAGCTA TGGAGCAACG GTTGCTTGTT | 600 |
ACTGAGAAGA GACAGCAGCA GATGATGACG TTCCTTGCCA AGGCGTTGAA | 650 |
CAATCCGAAC TTTGTTCAGC AGTTTGCGGT TATGAGTAAA GAGAAGAAGA | 700 |
GTTTGTTTGG TTTGGATGTG GGGAGGAAAC GGAGGCTTAC TTCTACTCCA | 750 |
AGCTTGGGGA CTATGGAGGA GAATTTGTTA CATGATCAAG AGTTTGATAG | 800 |
AATGAAGGAT GATATGGAAA TGTTGTTCGC TGCAGCAATC GATGATGAGG | 850 |
CGAATAATTC GATGCCTACT AAGGAGGAAC AATGTTTGGA GGCTATGAAT | 900 |
GTGATGATGA GAGATGGTAA TTTGGAAGCA GCGTTGGATG TGAAAGTGGA | 950 |
AGATTTGGTT GGTTCGCCTT TGGATTGGGA CAGCCAAGAT CTACATGACA | 1000 |
TGGTTGATCA AATGGGTTTT CTTGGTTCGG AACCTTAA | 1050 |
>AT2G26150.1 longest ORF length:345
MEELKVEMEE ETVTFTGSVA ASSSVGSSSS PRPMEGLNET GPPPFLTKTY | 50 |
EMVEDPATDT VVSWSNGRNS FVVWDSHKFS TTLLPRYFKH SNFSSFIRQL | 100 |
NTYGFRKIDP DRWEFANEGF LAGQKHLLKN IKRRRNMGLQ NVNQQGSGMS | 150 |
CVEVGQYGFD GEVERLKRDH GVLVAEVVRL RQQQHSSKSQ VAAMEQRLLV | 200 |
TEKRQQQMMT FLAKALNNPN FVQQFAVMSK EKKSLFGLDV GRKRRLTSTP | 250 |
SLGTMEENLL HDQEFDRMKD DMEMLFAAAI DDEANNSMPT KEEQCLEAMN | 300 |
VMMRDGNLEA ALDVKVEDLV GSPLDWDSQD LHDMVDQMGF LGSEP | 350 |
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