fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G26150 ATHSFA2 heat shock transcription factor A2 (.1.2)

>AT2G26150.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 76
BglII A|GATCT 987
HindIII A|AGCTT 750
PstI CTGCA|G 830
StyI C|C[AT][AT]GG 638


Click here to view TAIR data

>AT2G26150.1 length:1038
ATGGAAGAAC TGAAAGTGGA AATGGAGGAA GAAACGGTGA CGTTTACTGG 
50
TTCTGTAGCG GCTTCTTCAT CTGTAGGATC CTCTTCCTCT CCTAGACCAA 
100
TGGAAGGGCT TAACGAAACA GGGCCACCAC CGTTTCTGAC TAAGACTTAC 
150
GAAATGGTGG AAGATCCGGC GACGGACACG GTGGTTTCTT GGAGTAATGG 
200
TCGTAACAGC TTTGTGGTGT GGGATTCTCA TAAGTTCTCA ACAACTCTCC 
250
TTCCACGTTA CTTCAAGCAT AGCAATTTCT CAAGTTTTAT TCGTCAGCTC 
300
AATACTTATG GATTCAGAAA GATTGATCCA GATAGATGGG AATTTGCAAA 
350
TGAAGGGTTT TTAGCAGGAC AAAAGCATCT CTTGAAGAAC ATCAAAAGAA 
400
GGAGGAACAT GGGTTTGCAG AATGTGAATC AGCAAGGATC TGGGATGTCA 
450
TGTGTTGAGG TTGGGCAATA CGGTTTCGAC GGGGAGGTTG AGAGGTTGAA 
500
GAGGGATCAT GGTGTGCTTG TAGCTGAGGT AGTTAGGTTG AGGCAACAGC 
550
AACACAGCTC CAAGAGTCAA GTTGCAGCTA TGGAGCAACG GTTGCTTGTT 
600
ACTGAGAAGA GACAGCAGCA GATGATGACG TTCCTTGCCA AGGCGTTGAA 
650
CAATCCGAAC TTTGTTCAGC AGTTTGCGGT TATGAGTAAA GAGAAGAAGA 
700
GTTTGTTTGG TTTGGATGTG GGGAGGAAAC GGAGGCTTAC TTCTACTCCA 
750
AGCTTGGGGA CTATGGAGGA GAATTTGTTA CATGATCAAG AGTTTGATAG 
800
AATGAAGGAT GATATGGAAA TGTTGTTCGC TGCAGCAATC GATGATGAGG 
850
CGAATAATTC GATGCCTACT AAGGAGGAAC AATGTTTGGA GGCTATGAAT 
900
GTGATGATGA GAGATGGTAA TTTGGAAGCA GCGTTGGATG TGAAAGTGGA 
950
AGATTTGGTT GGTTCGCCTT TGGATTGGGA CAGCCAAGAT CTACATGACA 
1000
TGGTTGATCA AATGGGTTTT CTTGGTTCGG AACCTTAA
1050

>AT2G26150.1 longest ORF length:345
MEELKVEMEE ETVTFTGSVA ASSSVGSSSS PRPMEGLNET GPPPFLTKTY 
50
EMVEDPATDT VVSWSNGRNS FVVWDSHKFS TTLLPRYFKH SNFSSFIRQL 
100
NTYGFRKIDP DRWEFANEGF LAGQKHLLKN IKRRRNMGLQ NVNQQGSGMS 
150
CVEVGQYGFD GEVERLKRDH GVLVAEVVRL RQQQHSSKSQ VAAMEQRLLV 
200
TEKRQQQMMT FLAKALNNPN FVQQFAVMSK EKKSLFGLDV GRKRRLTSTP 
250
SLGTMEENLL HDQEFDRMKD DMEMLFAAAI DDEANNSMPT KEEQCLEAMN 
300
VMMRDGNLEA ALDVKVEDLV GSPLDWDSQD LHDMVDQMGF LGSEP
350