fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G26150 ATHSFA2 heat shock transcription factor A2 (.1.2)

>AT2G26150.2 CDS map

>>Show genomic map




Uncut enzymes: AatII, Acc65I, AccI, AccII(FnuDII), AccIII(BspMII), AciI, AclI, AfeI, AflII, AflIII, AgeI, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AseI, AvaI, AvaII, AvrII, BaeI, BalI, BamHI, BanI, BanII, BbsI, BbvCI, BbvI, BcgI, BciVI, BfaI, BglI, BlpI, BmrI, BpmI, BsaAI, BsaBI, BsaHI, BsaI, BsaWI, BsaXI, BseRI, BsgI, BsiEI, BsiHKAI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BsoBI, Bsp1286I, BspEI, BspHI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrFI, BsrGI, BsrI, BssHII, BssKI, BssSI, BstBI, BstEII, BstNI, BstUI, BstZ17I, Bsu36I, BtgI, BtrI, BtsI, Cac8I, Cfr10I, DraI, DraIII, DrdI, EaeI, EagI, EarI, EciI, EcoO109I, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HaeII, HaeIII, HgaI, HhaI, HinP1I, HincII, HpaI, HpaII, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, MslI, MspA1I, MspI, NaeI, , NarI, NciI, NcoI, NdeI, NgoMIV, NheI, NotI, NruI, NsiI, NspI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspGI, PspOMI, PvuI, PvuII, RsaI, RsrII, SacI, SacII, SalI, SapI, Sau96I, SbfI, ScaI, ScrFI, SexAI, SfaNI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SphI, SspI, StuI, SwaI, TliI, Tsp45I, TspRI, Tth111I, XbaI, XcmI, XhoI, XmaI, XmnI
Name Recognition sequence Cut positions
AluI AG|CT 10, 98, 133, 355, 389, 409, 584
ApoI Pu|AATTPy 175, 606
BclI T|GATCA 618, 840
BglII A|GATCT 822
BsaJI C|CNNGG 473
BslI CCNNNNN|NNGG 473, 588
BspDI AT|CGAT 673
BstAPI GCANNNN|NTGC 425
BstF5I GGATGNN| 279, 550, 643, 772
BstXI CCANNNNN|NTGG 169
BstYI Pu|GATCPy 271, 822
ClaI AT|CGAT 673
DdeI C|TNAG 358, 436, 703
DpnI GA-CH3|TC 158, 270, 338, 617, 821, 839
DpnII |GATC 158, 270, 338, 617, 821, 839
EcoNI CCTNN|NNNAGG 473
Fnu4HI GC|NGC 408, 449, 663, 762
HindIII A|AGCTT 585
HinfI G|ANTC 26, 126, 145, 260, 398
Hpy188I TCN|GA 148, 488, 861
Hpy99I CG[AT]CG| 311
HpyCH4III ACN|GT 304, 422
HpyCH4IV A|CGT 57, 461
HpyCH4V TG|CA 178, 249, 406, 664
MboI |GATC 158, 270, 338, 617, 821, 839
MseI T|TAA 868
MwoI GCNNNNN|NNGC 425
N.BstNBI GAGTCNNNN|N 131, 403
NlaIII CATG| 241, 282, 341, 614, 827, 832
NlaIV GGN|NCC 864
PstI CTGCA|G 665
Sau3AI |GATC 158, 270, 338, 617, 821, 839
SfcI C|TPuPyAG 665
SmlI C|TPyPuAG 83
StyI C|C[AT][AT]GG 473
Taqƒ¿I T|CGA 309, 672, 692
TfiI G|A[AT]TC 26, 145, 260
TseI G|C[AT]GC 408, 449, 663, 762
Tsp509I |AATT 76, 174, 605, 689, 752


Click here to view TAIR data

>AT2G26150.2 length:873
ATGGTCGTAA CAGCTTTGTG GTGTGGGATT CTCATAAGTT CTCAACAACT 
50
CTCCTTCCAC GTTACTTCAA GCATAGCAAT TTCTCAAGTT TTATTCGTCA 
100
GCTCAATACT TATATGGGTT TCCTATGAGT CTTCAGCTAT AAAGGGATTC 
150
AGAAAGATTG ATCCAGATAG ATGGGAATTT GCAAATGAAG GGTTTTTAGC 
200
AGGACAAAAG CATCTCTTGA AGAACATCAA AAGAAGGAGG AACATGGGTT 
250
TGCAGAATGT GAATCAGCAA GGATCTGGGA TGTCATGTGT TGAGGTTGGG 
300
CAATACGGTT TCGACGGGGA GGTTGAGAGG TTGAAGAGGG ATCATGGTGT 
350
GCTTGTAGCT GAGGTAGTTA GGTTGAGGCA ACAGCAACAC AGCTCCAAGA 
400
GTCAAGTTGC AGCTATGGAG CAACGGTTGC TTGTTACTGA GAAGAGACAG 
450
CAGCAGATGA TGACGTTCCT TGCCAAGGCG TTGAACAATC CGAACTTTGT 
500
TCAGCAGTTT GCGGTTATGA GTAAAGAGAA GAAGAGTTTG TTTGGTTTGG 
550
ATGTGGGGAG GAAACGGAGG CTTACTTCTA CTCCAAGCTT GGGGACTATG 
600
GAGGAGAATT TGTTACATGA TCAAGAGTTT GATAGAATGA AGGATGATAT 
650
GGAAATGTTG TTCGCTGCAG CAATCGATGA TGAGGCGAAT AATTCGATGC 
700
CTACTAAGGA GGAACAATGT TTGGAGGCTA TGAATGTGAT GATGAGAGAT 
750
GGTAATTTGG AAGCAGCGTT GGATGTGAAA GTGGAAGATT TGGTTGGTTC 
800
GCCTTTGGAT TGGGACAGCC AAGATCTACA TGACATGGTT GATCAAATGG 
850
GTTTTCTTGG TTCGGAACCT TAA
900

>AT2G26150.2 longest ORF length:290
MVVTALWCGI LISSQQLSFH VTSSIAISQV LFVSSILIWV SYESSAIKGF 
50
RKIDPDRWEF ANEGFLAGQK HLLKNIKRRR NMGLQNVNQQ GSGMSCVEVG 
100
QYGFDGEVER LKRDHGVLVA EVVRLRQQQH SSKSQVAAME QRLLVTEKRQ 
150
QQMMTFLAKA LNNPNFVQQF AVMSKEKKSL FGLDVGRKRR LTSTPSLGTM 
200
EENLLHDQEF DRMKDDMEML FAAAIDDEAN NSMPTKEEQC LEAMNVMMRD 
250
GNLEAALDVK VEDLVGSPLD WDSQDLHDMV DQMGFLGSEP 
300