fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G26940 C2H2-type zinc finger family protein (.1)

>AT2G26940.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI
Name Recognition sequence Cut positions
BamHI G|GATCC 206
BglII A|GATCT 324
NdeI CA|TATG 409
XhoI C|TCGAG 791


Click here to view TAIR data

>AT2G26940.1 length:861
ATGAAGAGAA CAAGAGACCT TTATGGTGAT GAATCTTCTT CATCGGAATC 
50
TGAAGAGTTT CACCGGGAAA AAATCCGGGT GAAGGTGAAG TTACCGGAAG 
100
AAAGAAGTGA AGATGAAGAT GAGTCTCCTC AGCCTCAGAG GAAGCACTTT 
150
TGTGTGATTT GTGAGAAGCA GTTTAGCTCT GGTAAGGCTT ATGGTGGTCA 
200
CGTGAGGATC CACTCCATTG AGTACAATAA CAAGGGAAAG ATGAAGAAGA 
250
TGAAGAAGAT GAAGTTGAAG AAGAAGAAGA AGAGAAAGAT TGGTTTGGTG 
300
AAGAAAGAGA AGGAGAAAGA GATAGATCTG GCTAGGACTG ACGTGGAAGG 
350
TAAGATTAGG TGTTGTCTTT GTGGAAAAGA GTTTCAAACA ATGCACTCTT 
400
TGTTTGGTCA TATGAGGAGA CATCCTGACC GGACTTGGAA AGGGATACGA 
450
CCTCCTCCAC CATCGGAGAA GTTCAATCTA AGCTACTTGG ATGATGATGT 
500
CGATGATGAA GATGAGGATG ATGATGATGT GATGAGTAGA TCCATGATGA 
550
TGAGTGATGT ACCCGAGGAT GTTCAGGGAG CTGCTTGCAT TCTAATGATG 
600
CTCTCTTACG CTTCAAGAAA TTACTGGGCT GGGATAGAGG AATCACCAAA 
650
ATCCGAGGTA AGAAGTTCGA GTTTCTACAA AGATGATGAA GGAAAAGATA 
700
AAGTATTAGG AGATAGTAGG ATGGATGAAA AGAAGGGTTT GATTGTAGAT 
750
ATGAAGATAA AGATGGAAAT GGAAGTGAAG GTGAATAGTC CTCGAGATGA 
800
AGCTAAGAGG TCATTAGGGT TTGATCTCAA TCAGCCTCCT TACCATGAAG 
850
ATCATCCTTA A
900

>AT2G26940.1 longest ORF length:286
MKRTRDLYGD ESSSSESEEF HREKIRVKVK LPEERSEDED ESPQPQRKHF 
50
CVICEKQFSS GKAYGGHVRI HSIEYNNKGK MKKMKKMKLK KKKKRKIGLV 
100
KKEKEKEIDL ARTDVEGKIR CCLCGKEFQT MHSLFGHMRR HPDRTWKGIR 
150
PPPPSEKFNL SYLDDDVDDE DEDDDDVMSR SMMMSDVPED VQGAACILMM 
200
LSYASRNYWA GIEESPKSEV RSSSFYKDDE GKDKVLGDSR MDEKKGLIVD 
250
MKIKMEMEVK VNSPRDEAKR SLGFDLNQPP YHEDHP
300