fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G27110 FRS3 FAR1-related sequence 3 (.1.2.3)

>AT2G27110.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HpaI, NdeI, NheI, NotI, PacI, SalI, SmaI, SpeI, XbaI
Name Recognition sequence Cut positions
BglII A|GATCT 703, 1368
HindIII A|AGCTT 229, 1568, 1856, 2392
KpnI GGTAC|C 1203
NcoI C|CATGG 1415, 2330
PstI CTGCA|G 1235, 1611
PvuII CAG|CTG 1614, 1850, 1991, 2293
SacI GAGCT|C 1193, 2072
StyI C|C[AT][AT]GG 1251, 1415, 2330
XhoI C|TCGAG 204, 1190


Click here to view TAIR data

>AT2G27110.1 length:2556
ATGGATGTTC ATTTGGTGGA AGAGAATGTG TCAATGGGGA ATCATGAGAT 
50
AGGAGATGAA GGAGATGTTG AACCTAGTGA TTGCAGTGGA CAGAACAACA 
100
TGGATAACTC GTTAGGGGTG CAAGATGAGA TTGGAATTGC AGAGCCATGT 
150
GTTGGTATGG AGTTTAATTC AGAAAAAGAA GCTAAATCTT TCTATGATGA 
200
GTACTCGAGG CAGCTTGGTT TTACTTCTAA GCTTCTTCCT AGAACTGATG 
250
GGTCTGTTAG TGTTCGAGAA TTTGTGTGTA GTAGTAGTAG TAAAAGGTCA 
300
AAGAGAAGGC TTTCTGAGAG TTGTGATGCA ATGGTTAGGA TAGAGTTGCA 
350
AGGTCATGAG AAATGGGTTG TTACAAAGTT TGTTAAAGAG CATACTCATG 
400
GATTAGCAAG TTCTAATATG CTTCATTGTC TTCGTCCTCG TAGGCATTTT 
450
GCTAACTCGG AGAAATCTAG TTATCAAGAA GGGGTTAATG TGCCTAGTGG 
500
TATGATGTAT GTTTCTATGG ATGCTAATAG CAGAGGAGCT AGAAATGCGT 
550
CTATGGCTAC AAACACGAAG AGAACGATTG GACGGGATGC ACATAATCTG 
600
TTGGAGTATT TTAAGAGGAT GCAGGCAGAG AATCCTGGCT TTTTCTATGC 
650
GGTTCAGCTT GATGAAGATA ATCAGATGTC AAATGTGTTT TGGGCTGATT 
700
CGAGATCTAG GGTTGCTTAT ACTCATTTTG GTGACACGGT TACCTTAGAT 
750
ACGAGGTACA GGTGCAATCA GTTTCGTGTT CCTTTTGCGC CATTTACTGG 
800
TGTGAATCAT CATGGTCAGG CTATCTTATT TGGCTGTGCA CTTATTTTGG 
850
ACGAGTCAGA CACTTCATTT ATCTGGCTGT TCAAGACTTT TCTAACAGCA 
900
ATGAGAGATC AACCGCCGGT TTCTTTGGTG ACTGATCAAG ATAGAGCCAT 
950
ACAGATTGCT GCTGGTCAGG TATTTCCAGG TGCTCGTCAC TGTATTAATA 
1000
AGTGGGATGT GCTAAGAGAA GGTCAGGAAA AGCTGGCTCA TGTGTGTCTT 
1050
GCGTATCCTA GTTTTCAGGT GGAGCTATAT AATTGTATCA ACTTTACTGA 
1100
AACGATTGAG GAGTTTGAAT CGTCCTGGAG TTCTGTCATT GACAAATATG 
1150
ACTTAGGAAG ACATGAATGG CTTAATTCTT TATATAATGC TCGAGCTCAG 
1200
TGGGTACCTG TTTATTTCCG GGATTCGTTT TTTGCTGCAG TGTTTCCTAG 
1250
CCAAGGTTAT TCGGGTTCCT TTTTCGATGG ATATGTGAAT CAGCAGACAA 
1300
CCCTTCCGAT GTTCTTTAGG CTGTACGAAA GGGCTATGGA GAGCTGGTTC 
1350
GAGATGGAGA TTGAAGCAGA TCTTGACACT GTCAACACAC CTCCAGTCTT 
1400
GAAGACGCCA TCACCCATGG AGAATCAGGC TGCAAATCTC TTTACAAGGA 
1450
AAATATTTGG AAAGTTCCAG GAAGAGTTGG TAGAGACATT CGCTCACACG 
1500
GCAAACAGAA TTGAAGATGA TGGTACTACC AGCACATTTA GGGTTGCAAA 
1550
TTTTGAAAAT GACAACAAAG CTTATATAGT AACGTTTTGC TACCCTGAAA 
1600
TGAGAGCAAA CTGCAGCTGT CAAATGTTTG AGCACTCCGG CATACTCTGC 
1650
CGACATGTTT TGACGGTGTT TACTGTCACT AATATACTCA CTTTGCCACC 
1700
ACATTATATT TTGAGACGGT GGACAAGAAA TGCCAAGAGC ATGGTAGAGT 
1750
TAGATGAGCA TGTCAGTGAA AATGGGCATG ATAGCTCGAT ACACCGCTAT 
1800
AATCATTTAT GTCGCGAAGC CATCAAGTAT GCTGAGGAAG GGGCAATTAC 
1850
AGCTGAAGCT TATAATATTG CTTTAGGGCA ACTCAGAGAA GGTGGAAAGA 
1900
AGGTTTCAGT TGTCAGGAAA AGGATAGGTA GAGCTGCGCC TCCTAGCTCA 
1950
CATGGTGGTG GAATTGGTAG TGGTGACAAG ACCTCTCTAT CAGCTGCTGA 
2000
CACAACCCCT TTGCTGTGGC CGCGCCAGGA TGAAATGATA CGCAGATTTA 
2050
ACCTTAACGA TGGTGGGGCC AGAGCTCAAT CTGTTTCTGA TCTGAATCTG 
2100
CCGCGTATGG CACCAGTGTC ACTTCACCGA GATGATACTG CTCCTGAGAA 
2150
TATGGTGGCT CTTCCTTGTC TTAAGTCATT GACTTGGGGG ATGGAGAGTA 
2200
AAAATACAAT GCCGGGTGGT AGAGTTGCAG TTATCAATTT AAAGTTGCAC 
2250
GATTACAGAA AGTTTCCCTC AGCAGACATG GATGTCAAAT TTCAGCTGTC 
2300
TAGCGTCACA CTTGAACCCA TGTTAAGGTC CATGGCTTAC ATTAGCGAGC 
2350
AACTTTCATC TCCAGCCAAT AGAGTAGCTG TCATCAATTT GAAGCTTCAA 
2400
GATACCGAGA CAACAACAGG AGAATCAGAG GTCAAGTTTC AGGTGTCCCG 
2450
AGATACACTA GGTGCCATGT TGAGATCAAT GGCCTATATC CGTGAGCAGC 
2500
TCTCAATCGT TGGAGAGCTA CAAACAGAAT CTCAAGCAAA GAAGCAACGC 
2550
AAATGA
2600

>AT2G27110.1 longest ORF length:851
MDVHLVEENV SMGNHEIGDE GDVEPSDCSG QNNMDNSLGV QDEIGIAEPC 
50
VGMEFNSEKE AKSFYDEYSR QLGFTSKLLP RTDGSVSVRE FVCSSSSKRS 
100
KRRLSESCDA MVRIELQGHE KWVVTKFVKE HTHGLASSNM LHCLRPRRHF 
150
ANSEKSSYQE GVNVPSGMMY VSMDANSRGA RNASMATNTK RTIGRDAHNL 
200
LEYFKRMQAE NPGFFYAVQL DEDNQMSNVF WADSRSRVAY THFGDTVTLD 
250
TRYRCNQFRV PFAPFTGVNH HGQAILFGCA LILDESDTSF IWLFKTFLTA 
300
MRDQPPVSLV TDQDRAIQIA AGQVFPGARH CINKWDVLRE GQEKLAHVCL 
350
AYPSFQVELY NCINFTETIE EFESSWSSVI DKYDLGRHEW LNSLYNARAQ 
400
WVPVYFRDSF FAAVFPSQGY SGSFFDGYVN QQTTLPMFFR LYERAMESWF 
450
EMEIEADLDT VNTPPVLKTP SPMENQAANL FTRKIFGKFQ EELVETFAHT 
500
ANRIEDDGTT STFRVANFEN DNKAYIVTFC YPEMRANCSC QMFEHSGILC 
550
RHVLTVFTVT NILTLPPHYI LRRWTRNAKS MVELDEHVSE NGHDSSIHRY 
600
NHLCREAIKY AEEGAITAEA YNIALGQLRE GGKKVSVVRK RIGRAAPPSS 
650
HGGGIGSGDK TSLSAADTTP LLWPRQDEMI RRFNLNDGGA RAQSVSDLNL 
700
PRMAPVSLHR DDTAPENMVA LPCLKSLTWG MESKNTMPGG RVAVINLKLH 
750
DYRKFPSADM DVKFQLSSVT LEPMLRSMAY ISEQLSSPAN RVAVINLKLQ 
800
DTETTTGESE VKFQVSRDTL GAMLRSMAYI REQLSIVGEL QTESQAKKQR 
850
K
900