fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G27110 FRS3 FAR1-related sequence 3 (.1.2.3)

>AT2G27110.3 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HpaI, NdeI, NheI, NotI, PacI, SalI, SmaI, SpeI, XbaI
Name Recognition sequence Cut positions
BglII A|GATCT 268, 933
HindIII A|AGCTT 1133, 1421, 1957
KpnI GGTAC|C 768
NcoI C|CATGG 980, 1895
PstI CTGCA|G 800, 1176
PvuII CAG|CTG 1179, 1415, 1556, 1858
SacI GAGCT|C 758, 1637
StyI C|C[AT][AT]GG 816, 980, 1895
XhoI C|TCGAG 755


Click here to view TAIR data

>AT2G27110.3 length:2121
ATGTGTTGGC ATTTTGCTAA CTCGGAGAAA TCTAGTTATC AAGAAGGGGT 
50
TAATGTGCCT AGTGGTATGA TGTATGTTTC TATGGATGCT AATAGCAGAG 
100
GAGCTAGAAA TGCGTCTATG GCTACAAACA CGAAGAGAAC GATTGGACGG 
150
GATGCACATA ATCTGTTGGA GTATTTTAAG AGGATGCAGG CAGAGAATCC 
200
TGGCTTTTTC TATGCGGTTC AGCTTGATGA AGATAATCAG ATGTCAAATG 
250
TGTTTTGGGC TGATTCGAGA TCTAGGGTTG CTTATACTCA TTTTGGTGAC 
300
ACGGTTACCT TAGATACGAG GTACAGGTGC AATCAGTTTC GTGTTCCTTT 
350
TGCGCCATTT ACTGGTGTGA ATCATCATGG TCAGGCTATC TTATTTGGCT 
400
GTGCACTTAT TTTGGACGAG TCAGACACTT CATTTATCTG GCTGTTCAAG 
450
ACTTTTCTAA CAGCAATGAG AGATCAACCG CCGGTTTCTT TGGTGACTGA 
500
TCAAGATAGA GCCATACAGA TTGCTGCTGG TCAGGTATTT CCAGGTGCTC 
550
GTCACTGTAT TAATAAGTGG GATGTGCTAA GAGAAGGTCA GGAAAAGCTG 
600
GCTCATGTGT GTCTTGCGTA TCCTAGTTTT CAGGTGGAGC TATATAATTG 
650
TATCAACTTT ACTGAAACGA TTGAGGAGTT TGAATCGTCC TGGAGTTCTG 
700
TCATTGACAA ATATGACTTA GGAAGACATG AATGGCTTAA TTCTTTATAT 
750
AATGCTCGAG CTCAGTGGGT ACCTGTTTAT TTCCGGGATT CGTTTTTTGC 
800
TGCAGTGTTT CCTAGCCAAG GTTATTCGGG TTCCTTTTTC GATGGATATG 
850
TGAATCAGCA GACAACCCTT CCGATGTTCT TTAGGCTGTA CGAAAGGGCT 
900
ATGGAGAGCT GGTTCGAGAT GGAGATTGAA GCAGATCTTG ACACTGTCAA 
950
CACACCTCCA GTCTTGAAGA CGCCATCACC CATGGAGAAT CAGGCTGCAA 
1000
ATCTCTTTAC AAGGAAAATA TTTGGAAAGT TCCAGGAAGA GTTGGTAGAG 
1050
ACATTCGCTC ACACGGCAAA CAGAATTGAA GATGATGGTA CTACCAGCAC 
1100
ATTTAGGGTT GCAAATTTTG AAAATGACAA CAAAGCTTAT ATAGTAACGT 
1150
TTTGCTACCC TGAAATGAGA GCAAACTGCA GCTGTCAAAT GTTTGAGCAC 
1200
TCCGGCATAC TCTGCCGACA TGTTTTGACG GTGTTTACTG TCACTAATAT 
1250
ACTCACTTTG CCACCACATT ATATTTTGAG ACGGTGGACA AGAAATGCCA 
1300
AGAGCATGGT AGAGTTAGAT GAGCATGTCA GTGAAAATGG GCATGATAGC 
1350
TCGATACACC GCTATAATCA TTTATGTCGC GAAGCCATCA AGTATGCTGA 
1400
GGAAGGGGCA ATTACAGCTG AAGCTTATAA TATTGCTTTA GGGCAACTCA 
1450
GAGAAGGTGG AAAGAAGGTT TCAGTTGTCA GGAAAAGGAT AGGTAGAGCT 
1500
GCGCCTCCTA GCTCACATGG TGGTGGAATT GGTAGTGGTG ACAAGACCTC 
1550
TCTATCAGCT GCTGACACAA CCCCTTTGCT GTGGCCGCGC CAGGATGAAA 
1600
TGATACGCAG ATTTAACCTT AACGATGGTG GGGCCAGAGC TCAATCTGTT 
1650
TCTGATCTGA ATCTGCCGCG TATGGCACCA GTGTCACTTC ACCGAGATGA 
1700
TACTGCTCCT GAGAATATGG TGGCTCTTCC TTGTCTTAAG TCATTGACTT 
1750
GGGGGATGGA GAGTAAAAAT ACAATGCCGG GTGGTAGAGT TGCAGTTATC 
1800
AATTTAAAGT TGCACGATTA CAGAAAGTTT CCCTCAGCAG ACATGGATGT 
1850
CAAATTTCAG CTGTCTAGCG TCACACTTGA ACCCATGTTA AGGTCCATGG 
1900
CTTACATTAG CGAGCAACTT TCATCTCCAG CCAATAGAGT AGCTGTCATC 
1950
AATTTGAAGC TTCAAGATAC CGAGACAACA ACAGGAGAAT CAGAGGTCAA 
2000
GTTTCAGGTG TCCCGAGATA CACTAGGTGC CATGTTGAGA TCAATGGCCT 
2050
ATATCCGTGA GCAGCTCTCA ATCGTTGGAG AGCTACAAAC AGAATCTCAA 
2100
GCAAAGAAGC AACGCAAATG A
2150

>AT2G27110.3 longest ORF length:706
MCWHFANSEK SSYQEGVNVP SGMMYVSMDA NSRGARNASM ATNTKRTIGR 
50
DAHNLLEYFK RMQAENPGFF YAVQLDEDNQ MSNVFWADSR SRVAYTHFGD 
100
TVTLDTRYRC NQFRVPFAPF TGVNHHGQAI LFGCALILDE SDTSFIWLFK 
150
TFLTAMRDQP PVSLVTDQDR AIQIAAGQVF PGARHCINKW DVLREGQEKL 
200
AHVCLAYPSF QVELYNCINF TETIEEFESS WSSVIDKYDL GRHEWLNSLY 
250
NARAQWVPVY FRDSFFAAVF PSQGYSGSFF DGYVNQQTTL PMFFRLYERA 
300
MESWFEMEIE ADLDTVNTPP VLKTPSPMEN QAANLFTRKI FGKFQEELVE 
350
TFAHTANRIE DDGTTSTFRV ANFENDNKAY IVTFCYPEMR ANCSCQMFEH 
400
SGILCRHVLT VFTVTNILTL PPHYILRRWT RNAKSMVELD EHVSENGHDS 
450
SIHRYNHLCR EAIKYAEEGA ITAEAYNIAL GQLREGGKKV SVVRKRIGRA 
500
APPSSHGGGI GSGDKTSLSA ADTTPLLWPR QDEMIRRFNL NDGGARAQSV 
550
SDLNLPRMAP VSLHRDDTAP ENMVALPCLK SLTWGMESKN TMPGGRVAVI 
600
NLKLHDYRKF PSADMDVKFQ LSSVTLEPML RSMAYISEQL SSPANRVAVI 
650
NLKLQDTETT TGESEVKFQV SRDTLGAMLR SMAYIREQLS IVGELQTESQ 
700
AKKQRK
750