|
|
|
|
|
|
|
|
| Locus | Common name | Short description |
| AT2G27230 | LHW, bHLH156 | LONESOME HIGHWAY, transcription factor-related (.1.2) |
>AT2G27230.2 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, KpnI, NcoI, NheI, NotI, PacI, SalI, SmaI
| Name | Recognition sequence | Cut positions |
| BglII | A|GATCT | 1103 |
| HindIII | A|AGCTT | 20, 1728 |
| HpaI | GTT|AAC | 1737 |
| NdeI | CA|TATG | 530 |
| PstI | CTGCA|G | 481 |
| PvuII | CAG|CTG | 746 |
| SacI | GAGCT|C | 135 |
| SpeI | A|CTAGT | 1842 |
| StyI | C|C[AT][AT]GG | 1309, 1387 |
| XbaI | T|CTAGA | 1704 |
| XhoI | C|TCGAG | 1766 |
Click here to view TAIR data
>AT2G27230.2 length:1953
ATGGGAGTTT TACTAAGAGA AGCTTTAAGG TCTATGTGTG TTAATAATCA | 50 |
ATGGTCTTAT GCTGTTTTCT GGAAAATTGG CTGTCAAAAT TCTAGCTTGT | 100 |
TGATTTGGGA GGAATGTTAC AATGAAACCG AATCGAGCTC GAATCCTAGA | 150 |
AGACTTTGTG GACTTGGTGT TGATACACAA GGGAATGAGA AAGTTCAGTT | 200 |
GCTTACAAAC CGAATGATGT TGAACAATCG AATCATTTTG GTAGGTGAAG | 250 |
GTCTAGTTGG CCGAGCTGCA TTTACTGGAC ATCATCAATG GATTCTAGCT | 300 |
AACAGTTTTA ACCGCGATGT TCATCCACCC GAGGTTATTA ATGAGATGCT | 350 |
TCTCCAATTC TCTGCTGGTA TTCAGACTGT TGCAGTTTTT CCGGTTGTTC | 400 |
CTCACGGTGT TGTTCAGCTC GGTTCCTCTC TGCCTATTAT GGAGAACTTG | 450 |
GGGTTTGTGA ATGACGTGAA GGGTCTTATC CTGCAGCTCG GATGTGTTCC | 500 |
GGGGGCTCTC TTATCTGAAA ACTACAGAAC ATATGAACCT GCTGCTGATT | 550 |
TTATTGGAGT GCCAGTGTCT CGGATAATAC CTTCTCAAGG ACATAAGATC | 600 |
CTCCAATCTT CGGCTTTCGT AGCTGAAACT AGCAAACAAC ATTTCAACTC | 650 |
CACTGGATCA TCAGATCATC AAATGGTTGA AGAATCTCCC TGTAATCTTG | 700 |
TGGATGAACA TGAAGGAGGA TGGCAAAGCA CAACAGGATT TCTAACAGCT | 750 |
GGAGAAGTTG CAGTACCTTC AAATCCAGAT GCGTGGCTGA ATCAAAACTT | 800 |
CTCTTGTATG TCTAATGTGG ATGCAGCAGA GCAGCAACAA ATCCCATGTG | 850 |
AAGACATCAG TTCGAAACGC TCGCTTGGAA GCGACGACTT GTTTGATATG | 900 |
TTGGGTTTGG ATGATAAGAA CAAAGGTTGT GACAACAGTT GGGGAGTTTC | 950 |
ACAGATGAGA ACAGAAGTAC TCACTAGAGA GTTATCCGAC TTTCGGATCA | 1000 |
TTCAAGAAAT GGACCCTGAG TTCGGTTCTT CGGGGTATGA ACTTTCAGGA | 1050 |
ACAGATCATC TGTTAGATGC CGTGGTCTCG GGTGCTTGCT CCTCCACAAA | 1100 |
GCAGATCTCA GACGAAACTT CCGAGTCCTG CAAAACCACC TTGACTAAAG | 1150 |
TTAGTAATTC TTCGGTTACC ACGCCGTCTC ACAGTAGCCC TCAAGGTAGC | 1200 |
CAGTTATTTG AGAAGAAACA TGGGCAACCA TTGGGGCCAT CATCGGTCTA | 1250 |
CGGGTCTCAG ATAAGTTCTT GGGTTGAACA AGCGCACAGC TTGAAGCGTG | 1300 |
AGGGCAGTCC AAGGATGGTG AACAAGAATG AAACTGCAAA ACCGGCTAAT | 1350 |
AACCGGAAAA GGCTTAAACC AGGAGAGAAC CCAAGACCAA GGCCTAAAGA | 1400 |
TCGCCAAATG ATCCAAGATC GTGTCAAAGA GCTGCGTGAA ATAATACCAA | 1450 |
ACGGTGCAAA ATGTAGCATT GATGCACTCC TTGAACGTAC AATCAAGCAC | 1500 |
ATGCTCTTCT TGCAAAATGT CTCCAAGCAT TCTGATAAGC TGAAGCAAAC | 1550 |
CGGGGAATCC AAGATTATGA AAGAGGACGG TGGAGGAGCA ACATGGGCTT | 1600 |
TCGAAGTAGG GTCAAAGTCT ATGGTGTGTC CAATTGTCGT AGAAGATATA | 1650 |
AACCCGCCTC GCATTTTCCA AGTCGAGATG TTATGCGAGC AACGAGGATT | 1700 |
CTTTCTAGAA ATCGCAGATT GGATCAGAAG CTTAGGGTTA ACGATCTTGA | 1750 |
AGGGAGTCAT CGAAACTCGA GTAGACAAGA TTTGGGCTCG CTTCACTGTT | 1800 |
GAGGCGAGTC GCGACGTGAC GAGGATGGAA ATATTCATGC AACTAGTGAA | 1850 |
TATTTTGGAG CAGACAATGA AATGTGGAGG AAACTCTAAG ACTATTTTGG | 1900 |
ATGGTATCAA AGCTACAATG CCTTTACCGG TTACTGGTGG CTGTTCAATG | 1950 |
TAA | 2000 |
>AT2G27230.2 longest ORF length:650
MGVLLREALR SMCVNNQWSY AVFWKIGCQN SSLLIWEECY NETESSSNPR | 50 |
RLCGLGVDTQ GNEKVQLLTN RMMLNNRIIL VGEGLVGRAA FTGHHQWILA | 100 |
NSFNRDVHPP EVINEMLLQF SAGIQTVAVF PVVPHGVVQL GSSLPIMENL | 150 |
GFVNDVKGLI LQLGCVPGAL LSENYRTYEP AADFIGVPVS RIIPSQGHKI | 200 |
LQSSAFVAET SKQHFNSTGS SDHQMVEESP CNLVDEHEGG WQSTTGFLTA | 250 |
GEVAVPSNPD AWLNQNFSCM SNVDAAEQQQ IPCEDISSKR SLGSDDLFDM | 300 |
LGLDDKNKGC DNSWGVSQMR TEVLTRELSD FRIIQEMDPE FGSSGYELSG | 350 |
TDHLLDAVVS GACSSTKQIS DETSESCKTT LTKVSNSSVT TPSHSSPQGS | 400 |
QLFEKKHGQP LGPSSVYGSQ ISSWVEQAHS LKREGSPRMV NKNETAKPAN | 450 |
NRKRLKPGEN PRPRPKDRQM IQDRVKELRE IIPNGAKCSI DALLERTIKH | 500 |
MLFLQNVSKH SDKLKQTGES KIMKEDGGGA TWAFEVGSKS MVCPIVVEDI | 550 |
NPPRIFQVEM LCEQRGFFLE IADWIRSLGL TILKGVIETR VDKIWARFTV | 600 |
EASRDVTRME IFMQLVNILE QTMKCGGNSK TILDGIKATM PLPVTGGCSM | 650 |