fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G27470 NF-YB11 "nuclear factor Y, subunit B11", nuclear factor Y, subunit B11 (.1)

>AT2G27470.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NotI, PacI, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
HindIII A|AGCTT 113
NheI G|CTAGC 36
PstI CTGCA|G 326
PvuII CAG|CTG 329


Click here to view TAIR data

>AT2G27470.1 length:828
ATGGAGTCGG AGAAAGTGGT GGTGGACGAG CTGCCGCTAG CTATTGTGCG 
50
CCGGGTGGTG AAGAAGAAGC TGTCGGAGTG TTCGCCGGAT TATGACGTCA 
100
GTATTCACAA GGAAGCTTTG CTCGCATTCT CAGAGAGTGC GAGGATCTTC 
150
ATCCACTACC TCTCCGCCAC GGCAAATGAT TTTTGTAAAG ATGCAAGAAG 
200
ACAAACTATG AAGGCTGATG ATGTGTTTAA GGCATTAGAA GAAATGGATT 
250
TTTCAGAATT TTTGGAGCCG CTTAAATCTT CTCTTGAAGA TTTTAAGAAG 
300
AAGAATGCGG GGAAAAAGGC GGGTGCTGCA GCTGCTTCGT ATCCTGCTGG 
350
TGGAGCTGCT TTGAAATCTT CAAGTGGAAC TGCTTCGAAG CCCAAAGAGA 
400
CGAAGAAGAG GAAACAGGAA GAACCATCTA CGCAAAAGGG TGCAAGGAAA 
450
AGCAAAATAG ATGAGGAAAC TAAGAGGAAT GACGAGGAGA CTGAGAATGA 
500
CAACACGGAA GAAGAGAATG GAAACGATGA GGAGGATGAG AATGGAAACG 
550
ATGAGGAAGA TGAGAATGAC GATGAAAATA CAGAAGAGAA TGGGAATGAT 
600
GAGGAGAACG ACGATGAAAA TACGGAAGAG AATGGGAATG ATGAGGAGAA 
650
CGAGAAGGAG GATGAGGAAA ACAGCATGGA AGAGAATGGG AATGAGAGCG 
700
AAGAGAGCGG GAATGAGGAC CATAGCATGG AAGAAAATGG GAGCGGGGTT 
750
GGTGAAGATA ATGAGAACGA GGACGGGAGC GTAAGTGGAA GTGGTGAAGA 
800
GGTAGAGAGT GATGAAGAAG ATGAATGA
850

>AT2G27470.1 longest ORF length:275
MESEKVVVDE LPLAIVRRVV KKKLSECSPD YDVSIHKEAL LAFSESARIF 
50
IHYLSATAND FCKDARRQTM KADDVFKALE EMDFSEFLEP LKSSLEDFKK 
100
KNAGKKAGAA AASYPAGGAA LKSSSGTASK PKETKKRKQE EPSTQKGARK 
150
SKIDEETKRN DEETENDNTE EENGNDEEDE NGNDEEDEND DENTEENGND 
200
EENDDENTEE NGNDEENEKE DEENSMEENG NESEESGNED HSMEENGSGV 
250
GEDNENEDGS VSGSGEEVES DEEDE
300