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| Locus | Common name | Short description |
| AT2G27990 | PNF, BLH8 | POUND-FOOLISH, BEL1-like homeodomain 8 (.1) |
>AT2G27990.1 CDS map
>>Show genomic map
Uncut enzymes: AatII, Acc65I, AccI, AccII(FnuDII), AccIII(BspMII), AfeI, AflII, AhdI, AlwI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AseI, AvrII, BaeI, BalI, BamHI, BanI, BanII, BbsI, BbvCI, BbvI, BcgI, BciVI, BglI, BlpI, BmrI, BpmI, BsaAI, BsaHI, BsaI, BsaXI, BseRI, BsgI, BsiHKAI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, Bsp1286I, BspEI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrGI, BssHII, BssSI, BstAPI, BstBI, BstEII, BstUI, BstXI, BstZ17I, Bsu36I, BtrI, DraI, DraIII, EarI, EciI, EcoNI, FauI, FokI, FseI, HaeII, HgaI, HindIII, HpaI, HphI, Hpy99I, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, N.BstNBI, , NarI, NdeI, NotI, NruI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PflFI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspOMI, PstI, PvuI, RsrII, SacI, SacII, SalI, SapI, SbfI, ScaI, SfaNI, SfcI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SphI, SwaI, TliI, Tth111I, XcmI, XhoI, XmaI, XmnI
| Name | Recognition sequence | Cut positions |
| AciI | C|CGC | 192, 1077, 1140 |
| AclI | AA|CGTT | 325 |
| AflIII | A|CPuPyGT | 1155, 1643 |
| AgeI | A|CCGGT | 162 |
| AluI | AG|CT | 721, 1147, 1659 |
| AlwNI | CAGNNN|CTG | 1064, 1307 |
| ApoI | Pu|AATTPy | 110, 556 |
| AvaI | C|PyCGPuG | 757 |
| AvaII | G|G[AT]CC | 374, 621 |
| BclI | T|GATCA | 300, 522 |
| BfaI | C|TAG | 243, 276, 414, 446, 702, 1376, 1506 |
| BglII | A|GATCT | 1222 |
| BsaBI | GATNN|NNATC | 136, 179, 777 |
| BsaJI | C|CNNGG | 549, 618, 884 |
| BsaWI | [AT]|CCGG[AT] | 162 |
| BsiEI | CGPuPy|CG | 393, 1597 |
| BslI | CCNNNNN|NNGG | 79, 371, 575, 768, 1284 |
| BsoBI | C|PyCGPuG | 757 |
| BspDI | AT|CGAT | 780 |
| BspHI | T|CATGA | 1737 |
| BsrFI | Pu|CCGGPy | 162, 810 |
| BsrI | ACTGGN| | 493, 611, 1390, 1720 |
| BssKI | |CCNGG | 395, 1406, 1585 |
| BstF5I | GGATGNN| | 892 |
| BstNI | CC|[AT]GG | 1406 |
| BstYI | Pu|GATCPy | 1222 |
| BtgI | C|CPuPyGG | 618, 884 |
| BtsI | GCAGTGNN| | 1305 |
| Cac8I | GCN|NGC | 604, 810, 1377 |
| Cfr10I | [AG]|CCGG[TC] | 162, 810 |
| ClaI | AT|CGAT | 780 |
| DdeI | C|TNAG | 85, 214, 409, 814, 937, 1134, 1314, 1662, 1699 |
| DpnI | GA-CH3|TC | 299, 344, 521, 1221, 1703 |
| DpnII | |GATC | 299, 344, 521, 1221, 1703 |
| DrdI | GACNNNN|NNGTC | 1596 |
| EaeI | Py|GGCCPu | 393 |
| EagI | C|GGCCG | 393 |
| EcoO109I | PuG|GNCCPy | 241, 1131 |
| EcoRI | G|AATTC | 110 |
| EcoRV | GAT|ATC | 691 |
| Fnu4HI | GC|NGC | 89, 192, 720 |
| FspI | TGC|GCA | 594 |
| HaeIII | GG|CC | 239, 315, 392, 749, 759, 1129, 1275, 1577 |
| HhaI | GCG|C | 593 |
| HinP1I | G|CGC | 593 |
| HincII | GTPy|PuAC | 732 |
| HinfI | G|ANTC | 83, 186, 256, 287, 399, 581, 873, 1204, 1251, 1359, 1697 |
| HpaII | C|CGG | 161, 394, 809, 1584 |
| Hpy188I | TCN|GA | 31, 98, 106, 342, 687, 815, 936, 1362, 1553 |
| HpyCH4III | ACN|GT | 282, 376, 474, 1038, 1059, 1085, 1186, 1542, 1595 |
| HpyCH4IV | A|CGT | 324, 708, 1297, 1641, 1652 |
| HpyCH4V | TG|CA | 328, 601, 718, 775, 987, 1001, 1032, 1300, 1498 |
| MboI | |GATC | 299, 344, 521, 1221, 1703 |
| MseI | T|TAA | 506, 1491 |
| MslI | CAPyNN|NNPuTG | 296, 1618 |
| MspA1I | C[AC]G|C[GT]G | 722 |
| MspI | C|CGG | 161, 394, 809, 1584 |
| MwoI | GCNNNNN|NNGC | 600, 1555 |
| NaeI | GCC|GGC | 810 |
| NciI | CC|[CG]GG | 395, 1585 |
| NcoI | C|CATGG | 884 |
| NgoMIV | G|CCGGC | 810 |
| NheI | G|CTAGC | 1377 |
| NlaIII | CATG| | 208, 418, 883, 1154, 1320, 1559, 1612, 1618, 1736 |
| NlaIV | GGN|NCC | 614, 807 |
| NsiI | ATGCA|T | 776 |
| NspI | PuCATG|Py | 209, 1155 |
| PciI | A|CATGT | 1155 |
| PflMI | CCANNNN|NTGG | 79, 371 |
| PspGI | |CC[AT]GG | 1406 |
| PvuII | CAG|CTG | 722 |
| RsaI | GT|AC | 158, 279, 489, 1009, 1348, 1609 |
| Sau3AI | |GATC | 299, 344, 521, 1221, 1703 |
| Sau96I | G|GNCC | 240, 374, 621, 750, 759, 1130, 1577 |
| ScrFI | CC|NGG | 395, 1406, 1585 |
| SexAI | A|CC[AT]GGT | 1407 |
| SmlI | C|TPyPuAG | 1170, 1477 |
| SpeI | A|CTAGT | 1507 |
| SspI | AAT|ATT | 369, 742 |
| StuI | AGG|CCT | 1276 |
| StyI | C|C[AT][AT]GG | 884 |
| Taqƒ¿I | T|CGA | 218, 358, 779, 794, 1598 |
| TfiI | G|A[AT]TC | 186, 256, 287, 581, 873, 1204, 1251, 1359 |
| TseI | G|C[AT]GC | 89, 720 |
| Tsp45I | |GT[CG]AC | 269, 1174, 1510, 1646 |
| Tsp509I | |AATT | 109, 248, 555, 1415, 1489 |
| TspRI | NNCA[CG]TGNN| | 262, 627, 1062, 1305, 1357 |
| XbaI | T|CTAGA | 447, 703 |
Click here to view TAIR data
>AT2G27990.1 length:1755
ATGGATATGA TAAAACCAGA TTTTCAACAA ATCCGAAGAG ATAAGTTTAG | 50 |
AGTTGAGCAA ATGAATGATT TTCCCAACAC TTGGACTCAG CAGCAGCATC | 100 |
AGAACATCAG AATTCCCAAC AACCTTGATT TGATTGGTAT CTTACAGAAC | 150 |
CAGATTTCCG TACCGGTTCA AACCGATTTG TATCAAGATT CTGCCGCAAC | 200 |
CTTTATGAAC ATGCCTCAGT CGATACATAG AGACCCACAA GGCCCTAGTA | 250 |
ATTGGAGAAT CAGTGATTTG TCACAACCTA GTACCGTGAA TCACGGATAT | 300 |
GATCAGGCTG GTATTAGGCC AAACAACGTT GCAGATTTGT TGTCCGATCA | 350 |
TTTCAGTTCT CGAAACCAAA TATTGGACCG TCCTCTTTAT GTCGGCCGGG | 400 |
ACTCTATTCC TCAGTCTAGC ATGATTAGGA GAAGTGAAGT TTCTTGTCTA | 450 |
GACGATAATC AAAAGGGTTG TGTAACGGTG GCTTGTTCGG GTACTGGTAA | 500 |
TGAGATTTTA AGGAGCAGTT ATGATCAAGG TTCTTCTTCT GGAAGTTACC | 550 |
GAGGAGAATT TTCGTTTCTC CCAAGTTTGG AGAATCAATC AGTTGCGCAC | 600 |
AATGCAAGCA ACTGGAACCA CGGACCAGTG AATGTTACTG CCACTTCTCA | 650 |
TACTAATAGT AAGAAAGGCT TTCCACTCTC ACTTTTGTCT GATATCCCTC | 700 |
CATCTAGAGA CGTTGGAAAT GCAGCTGTTT TGTCAACAAT GAATATTCAC | 750 |
GGCCCACTCG GGCCTTTCAC GGGATATGCA TCGATACTGA AGAGTTCGAG | 800 |
GTTCTTGGAG CCGGCTCAGA AAATGTTAGA AGAGTTTTGT ATCTCTTATG | 850 |
CTTCAAAGAT TATTAGTAGA AGTGAATCTA CTTCCATGGA GGATGATGAT | 900 |
GATGATGATG ATAACTTGTC AGGGTTTAGT AGTTCTTCTG AGCCATTAGA | 950 |
ACCCAAGAAT AGACTAAAGA AAGCAAAACT TCTCTTTCTG CAAGAAGAGG | 1000 |
TTTGCAAGTG GTACAAACTA TATAATCATC AGTTGCAAAC AGTTATGTCT | 1050 |
TCCTTCAATA CAGTGGCTGG TCTAAACACC GCAACACCGT ATATCTCGTT | 1100 |
GGCTCTCAAA CGGACTTCAC GAAGTTTCAA GGCCCTTAGA ACCGCAATAG | 1150 |
CTGAACATGT GAAGCAAATC TCAAGTCACT CATCAAACGG TAACAACAAC | 1200 |
AACCGATTCC AAAAGAGGCA AAGATCTTTG ATTGGTAACA ATGTCGGGTT | 1250 |
TGAATCTCAA CAACAACATA TCTGGAGGCC TCAAAGGGGA TTGCCCGAAC | 1300 |
GTGCAGTGGC TGTTCTTAGA GCATGGCTCT TTGACCATTT TCTTCATCCG | 1350 |
TACCCCACTG ATTCTGATAA GCAGATGCTA GCCACTCAAA CTGGTCTCTC | 1400 |
TCGTAACCAG GTATCAAATT GGTTCATAAA CGCCCGTGTG CGATTATGGA | 1450 |
AACCTATGGT GGAAGAAATA CACACACTTG AGACCAAAGC AATTAAAAAT | 1500 |
GCAGATACTA GTCACAACAT TGAGCCATCA AATAGACCGA ATACTGTTAG | 1550 |
CAGTCCGAGC CATGAACAAA CGCTAACGGG CCTCTCCGGG ACAAAACGGT | 1600 |
CGAGGTTAGA GTACATGGAC ATGGTGGGGT TCAATAGAGG GAACGTGTCA | 1650 |
CTCACGTTAG AGCTTAGGCG TGGTGTGGAC AATGTTATCC AAACGCAGAC | 1700 |
TCAGGATCAT CAGTTTGGAA CTGGAAGCCA AATGTTTCAT GACTTTGTGG | 1750 |
GTTGA | 1800 |
>AT2G27990.1 longest ORF length:584
MDMIKPDFQQ IRRDKFRVEQ MNDFPNTWTQ QQHQNIRIPN NLDLIGILQN | 50 |
QISVPVQTDL YQDSAATFMN MPQSIHRDPQ GPSNWRISDL SQPSTVNHGY | 100 |
DQAGIRPNNV ADLLSDHFSS RNQILDRPLY VGRDSIPQSS MIRRSEVSCL | 150 |
DDNQKGCVTV ACSGTGNEIL RSSYDQGSSS GSYRGEFSFL PSLENQSVAH | 200 |
NASNWNHGPV NVTATSHTNS KKGFPLSLLS DIPPSRDVGN AAVLSTMNIH | 250 |
GPLGPFTGYA SILKSSRFLE PAQKMLEEFC ISYASKIISR SESTSMEDDD | 300 |
DDDDNLSGFS SSSEPLEPKN RLKKAKLLFL QEEVCKWYKL YNHQLQTVMS | 350 |
SFNTVAGLNT ATPYISLALK RTSRSFKALR TAIAEHVKQI SSHSSNGNNN | 400 |
NRFQKRQRSL IGNNVGFESQ QQHIWRPQRG LPERAVAVLR AWLFDHFLHP | 450 |
YPTDSDKQML ATQTGLSRNQ VSNWFINARV RLWKPMVEEI HTLETKAIKN | 500 |
ADTSHNIEPS NRPNTVSSPS HEQTLTGLSG TKRSRLEYMD MVGFNRGNVS | 550 |
LTLELRRGVD NVIQTQTQDH QFGTGSQMFH DFVG | 600 |