fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G28350 ARF10 auxin response factor 10 (.1)

>AT2G28350.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BglII, EcoRV, KpnI, NdeI, NheI, NotI, PacI, SacI, SalI, SpeI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 21, 676
EcoRI G|AATTC 75
HindIII A|AGCTT 15
HpaI GTT|AAC 354, 562, 1704
NcoI C|CATGG 1063
PstI CTGCA|G 1325
PvuII CAG|CTG 911
SmaI CCC|GGG 1257
StyI C|C[AT][AT]GG 1063
XbaI T|CTAGA 264, 991


Click here to view TAIR data

>AT2G28350.1 length:2082
ATGGAGCAAG AGAAAAGCTT GGATCCACAA CTATGGCATG CTTGTGCAGG 
50
ATCAATGGTT CAAATCCCTT CACTGAATTC AACGGTTTTT TACTTCGCTC 
100
AAGGCCACAC AGAGCACGCT CACGCGCCTC CTGATTTTCA CGCGCCGCGC 
150
GTTCCACCTC TTATCCTCTG TCGTGTCGTC TCCGTGAAGT TCCTCGCCGA 
200
CGCTGAAACA GACGAAGTTT TTGCTAAAAT TACGCTTTTG CCACTTCCGG 
250
GAAACGACTT GGATCTAGAA AACGACGCCG TTTTGGGTCT AACTCCTCCT 
300
TCTTCTGACG GTAACGGTAA CGGTAAAGAG AAACCGGCGT CTTTCGCTAA 
350
AACGTTAACG CAGTCTGACG CTAATAACGG CGGTGGTTTC TCCGTTCCAC 
400
GTTATTGCGC CGAGACGATT TTCCCGCGGC TTGATTACTC GGCGGAGCCA 
450
CCGGTTCAAA CCGTGATTGC TAAAGACATC CACGGCGAGA CTTGGAAATT 
500
CCGGCATATT TACAGAGGAA CACCTCGCCG TCATCTCCTA ACCACCGGTT 
550
GGAGCACTTT CGTTAACCAG AAGAAACTAA TCGCCGGAGA CTCAATCGTC 
600
TTCCTCCGTT CTGAATCCGG TGACCTCTGC GTCGGAATCC GCCGCGCTAA 
650
ACGCGGCGGT CTCGGATCTA ACGCAGGATC CGACAATCCT TACCCTGGAT 
700
TCTCCGGTTT CCTCCGTGAC GACGAGTCAA CAACAACAAC ATCGAAGCTA 
750
ATGATGATGA AACGCAACGG AAACAACGAC GGAAACGCCG CGGCTACAGG 
800
GAGGGTTAGA GTAGAAGCAG TAGCGGAAGC GGTGGCGCGT GCAGCGTGTG 
850
GACAAGCGTT TGAGGTTGTT TATTATCCAC GCGCTAGTAC ACCGGAGTTT 
900
TGCGTAAAAG CAGCTGATGT TAGATCAGCA ATGAGGATAA GATGGTGTAG 
950
TGGTATGCGT TTTAAAATGG CGTTTGAAAC AGAGGATTCT TCTAGAATCA 
1000
GTTGGTTTAT GGGTACTGTC TCCGCCGTTC AAGTCGCTGA TCCAATTCGT 
1050
TGGCCTAATT CACCATGGCG TCTCCTTCAG GTAGCTTGGG ACGAACCGGA 
1100
TTTGTTACAA AACGTTAAGC GGGTTAGTCC GTGGTTAGTC GAATTGGTAT 
1150
CGAACATGCC TACAATACAT TTATCTCCAT TCTCTCCGAG GAAGAAGATT 
1200
AGGATTCCGC AGCCATTTGA GTTTCCATTC CACGGTACTA AATTCCCGAT 
1250
TTTCTCCCCG GGATTCGCCA ACAATGGCGG TGGCGAGTCC ATGTGTTATC 
1300
TGTCAAACGA CAACAATAAT GCTCCTGCAG GAATACAGGG AGCCAGGCAA 
1350
GCTCAACAAC TCTTCGGATC ACCATCTCCG TCTTTGTTGT CTGATCTCAA 
1400
TCTTAGTAGT TACACCGGTA ACAACAAGTT ACATTCTCCG GCGATGTTTC 
1450
TATCGAGTTT CAACCCGAGG CATCATCATT ATCAGGCTAG GGATAGTGAG 
1500
AATAGTAATA ACATTTCGTG TTCTTTAACT ATGGGGAATC CTGCTATGGT 
1550
TCAGGATAAG AAGAAGTCTG TTGGTTCGGT TAAGACTCAT CAGTTCGTGT 
1600
TGTTCGGTCA ACCGATTTTA ACCGAACAGC AAGTTATGAA CCGAAAACGG 
1650
TTTTTGGAAG AAGAGGCGGA AGCGGAGGAG GAGAAAGGTT TAGTGGCTCG 
1700
TGGGTTAACA TGGAATTATA GTTTGCAAGG ACTTGAGACG GGTCATTGTA 
1750
AAGTTTTCAT GGAATCTGAG GATGTTGGAC GCACACTCGA TCTCTCGGTT 
1800
ATTGGCTCGT ACCAAGAATT GTACCGGAAA TTGGCTGAGA TGTTTCATAT 
1850
AGAAGAGAGG TCGGATTTGT TGACTCATGT TGTGTACCGG GATGCAAATG 
1900
GTGTTATCAA ACGTATTGGA GACGAACCTT TCAGTGATTT CATGAAAGCA 
1950
ACTAAACGGC TAACAATCAA GATGGATATT GGTGGCGACA ACGTGAGAAA 
2000
GACGTGGATA ACCGGAATCA GGACTGGTGA AAATGGTATA GACGCTTCTA 
2050
CGAAGACTGG TCCGCTCAGC ATCTTCGCTT GA
2100

>AT2G28350.1 longest ORF length:693
MEQEKSLDPQ LWHACAGSMV QIPSLNSTVF YFAQGHTEHA HAPPDFHAPR 
50
VPPLILCRVV SVKFLADAET DEVFAKITLL PLPGNDLDLE NDAVLGLTPP 
100
SSDGNGNGKE KPASFAKTLT QSDANNGGGF SVPRYCAETI FPRLDYSAEP 
150
PVQTVIAKDI HGETWKFRHI YRGTPRRHLL TTGWSTFVNQ KKLIAGDSIV 
200
FLRSESGDLC VGIRRAKRGG LGSNAGSDNP YPGFSGFLRD DESTTTTSKL 
250
MMMKRNGNND GNAAATGRVR VEAVAEAVAR AACGQAFEVV YYPRASTPEF 
300
CVKAADVRSA MRIRWCSGMR FKMAFETEDS SRISWFMGTV SAVQVADPIR 
350
WPNSPWRLLQ VAWDEPDLLQ NVKRVSPWLV ELVSNMPTIH LSPFSPRKKI 
400
RIPQPFEFPF HGTKFPIFSP GFANNGGGES MCYLSNDNNN APAGIQGARQ 
450
AQQLFGSPSP SLLSDLNLSS YTGNNKLHSP AMFLSSFNPR HHHYQARDSE 
500
NSNNISCSLT MGNPAMVQDK KKSVGSVKTH QFVLFGQPIL TEQQVMNRKR 
550
FLEEEAEAEE EKGLVARGLT WNYSLQGLET GHCKVFMESE DVGRTLDLSV 
600
IGSYQELYRK LAEMFHIEER SDLLTHVVYR DANGVIKRIG DEPFSDFMKA 
650
TKRLTIKMDI GGDNVRKTWI TGIRTGENGI DASTKTGPLS IFA
700