Locus |
Common name |
Short description |
AT2G28510 |
AtDof2,1 |
Dof-type zinc finger DNA-binding family protein (.1) |
>AT2G28510.1 CDS map
>>Show genomic map

Uncut enzymes: AatII, Acc65I, AccI, AccII(FnuDII), AfeI, AflII, AflIII, AgeI, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, ApoI, AscI, AvaI, AvaII, AvrII, BaeI, BalI, BanI, BanII, BbsI, BbvI, BcgI, BciVI, BglI, BglII, BlpI, BmrI, BpmI, BsaAI, BsaHI, BsaI, BsaXI, BseRI, BsgI, BsiEI, BsiHKAI, BsiWI, BsmAI, BsmBI, BsmFI, BsoBI, Bsp1286I, BspDI, BspHI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrFI, BsrGI, BsrI, BssHII, BssSI, BstAPI, BstBI, BstEII, BstNI, BstUI, BstXI, BstZ17I, Bsu36I, BtrI, BtsI, Cac8I, Cfr10I, ClaI, DraI, DraIII, DrdI, EaeI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, EcoRV, FauI, Fnu4HI, FokI, FseI, FspI, HaeII, HaeIII, HgaI, HhaI, HinP1I, HincII, HindIII, HpaI, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, MslI, MspA1I, MwoI, N.BstNBI, NaeI, , NarI, NdeI, NgoMIV, NheI, NotI, NruI, NsiI, NspI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PspGI, PspOMI, PstI, PvuI, PvuII, RsrII, SacI, SacII, SalI, SapI, Sau96I, SbfI, ScaI, SexAI, SfaNI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SphI, SspI, StuI, SwaI, TliI, TseI, Tsp45I, TspRI, Tth111I, XbaI, XcmI, XhoI, XmaI, XmnI
Name |
Recognition sequence |
Cut positions |
AccIII(BspMII)
| T|CCGGA |
604 |
AciI
| C|CGC |
768 |
AclI
| AA|CGTT |
268 |
AluI
| AG|CT |
136, 316, 478, 806 |
AseI
| AT|TAAT |
349 |
BamHI
| G|GATCC |
3 |
BbvCI
| CC|TCAGC |
315 |
BclI
| T|GATCA |
417 |
BfaI
| C|TAG |
723, 862 |
BsaBI
| GATNN|NNATC |
159 |
BsaJI
| C|CNNGG |
748 |
BsaWI
| [AT]|CCGG[AT] |
604, 760, 783 |
BslI
| CCNNNNN|NNGG |
279, 495 |
BsmI
| GAATGCN| |
393 |
BspEI
| T|CCGGA |
604 |
BssKI
| |CCNGG |
795 |
BstF5I
| GGATGNN| |
657, 819 |
BstYI
| Pu|GATCPy |
3, 548 |
BtgI
| C|CPuPyGG |
748 |
DdeI
| C|TNAG |
314, 713 |
DpnI
| GA-CH3|TC |
2, 303, 362, 416, 428, 509, 547, 791 |
DpnII
| |GATC |
2, 303, 362, 416, 428, 509, 547, 791 |
HinfI
| G|ANTC |
159, 719, 765 |
HpaII
| C|CGG |
603, 759, 771, 782, 795 |
Hpy188I
| TCN|GA |
233, 371, 553, 714 |
Hpy99I
| CG[AT]CG| |
275, 291 |
HpyCH4III
| ACN|GT |
565 |
HpyCH4IV
| A|CGT |
267 |
HpyCH4V
| TG|CA |
221 |
MboI
| |GATC |
2, 303, 362, 416, 428, 509, 547, 791 |
MseI
| T|TAA |
348, 380 |
MspI
| C|CGG |
603, 759, 771, 782, 795 |
NciI
| CC|[CG]GG |
795 |
NcoI
| C|CATGG |
748 |
NlaIII
| CATG| |
747 |
NlaIV
| GGN|NCC |
3 |
PsiI
| TTA|TAA |
573 |
RsaI
| GT|AC |
255, 567, 779 |
Sau3AI
| |GATC |
2, 303, 362, 416, 428, 509, 547, 791 |
ScrFI
| CC|NGG |
795 |
SfcI
| C|TPuPyAG |
195 |
SmlI
| C|TPyPuAG |
476 |
StyI
| C|C[AT][AT]GG |
748 |
Taqƒ¿I
| T|CGA |
292 |
TfiI
| G|A[AT]TC |
159, 719, 765 |
Tsp509I
| |AATT |
123, 143, 350, 382 |
Click here to view TAIR data
>AT2G28510.1 length:867
ATGGATCCTG AACAGGAAAT CTCAAACGAG ACTTTGGAAA CTATATTGGT | 50 |
AAGTTCAACA AAAGGAAGCA ATAATAACAA TAAGAAAATG GAAGAAGAAA | 100 |
TGAAGAAGAA AGTATCAAGA GGAGAATTAG GAGGTGAAGC TCAAAATTGT | 150 |
CCAAGATGTG AATCTCCAAA CACAAAGTTT TGTTACTACA ACAACTATAG | 200 |
TCTCTCACAA CCTCGTTACT TCTGCAAATC TTGTCGGAGA TATTGGACTA | 250 |
AAGGCGGTAC TCTTCGTAAC GTTCCCGTCG GTGGTGGTTG CCGTCGAAAC | 300 |
AAACGATCCT CTTCCTCAGC TTTCTCCAAG AACAACAACA ATAAGTCTAT | 350 |
TAATTTCCAT ACTGATCCAC TTCAGAACCC TTTAATTACG GGAATGCCAC | 400 |
CATCATCTTT TGGTTATGAT CACTCCATTG ATCTCAACCT CGCTTTCGCT | 450 |
ACTCTCCAAA AGCATCATTT ATCCTCTCAA GCTACTACGC CTTCTTTTGG | 500 |
GTTTGGAGGT GATCTTTCTA TTTATGGAAA CTCAACGAAT GATGTAGGGA | 550 |
TCTTCGGAGG GCAAAACGGT ACTTATAACA ATAGTTTGTG TTATGGGTTT | 600 |
ATGTCCGGAA ATGGTAATAA TAATCAAAAT GAAATCAAGA TGGCTTCTAC | 650 |
ATTGGGGATG TCTTTGGAAG GAAACGAGAG AAAGCAAGAG AATGTGAACA | 700 |
ATAACAATAA TAACTCAGAG AATCCTAGCA AGGTGTTCTG GGGGTTTCCA | 750 |
TGGCAGATGA CCGGAGATTC CGCCGGAGTT GTACCGGAGA TTGATCCCGG | 800 |
AAGGGAAAGC TGGAATGGGA TGGTTTCATC TTGGAATAAT GGTTTACTCA | 850 |
ACACTCCTTT GGTCTAG | 900 |
>AT2G28510.1 longest ORF length:288
MDPEQEISNE TLETILVSST KGSNNNNKKM EEEMKKKVSR GELGGEAQNC | 50 |
PRCESPNTKF CYYNNYSLSQ PRYFCKSCRR YWTKGGTLRN VPVGGGCRRN | 100 |
KRSSSSAFSK NNNNKSINFH TDPLQNPLIT GMPPSSFGYD HSIDLNLAFA | 150 |
TLQKHHLSSQ ATTPSFGFGG DLSIYGNSTN DVGIFGGQNG TYNNSLCYGF | 200 |
MSGNGNNNQN EIKMASTLGM SLEGNERKQE NVNNNNNNSE NPSKVFWGFP | 250 |
WQMTGDSAGV VPEIDPGRES WNGMVSSWNN GLLNTPLV | 300 |
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