fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G28550 TOE1, RAP2.7 TARGET OF EARLY ACTIVATION TAGGED \(EAT\) 1, related to AP2.7 (.1.2.3)

>AT2G28550.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, EcoRI, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PvuII, SacI, SmaI, SpeI
Name Recognition sequence Cut positions
BamHI G|GATCC 1072
BglII A|GATCT 336
EcoRV GAT|ATC 613
PstI CTGCA|G 560
SalI G|TCGAC 36
StyI C|C[AT][AT]GG 439
XbaI T|CTAGA 322, 445
XhoI C|TCGAG 170


Click here to view TAIR data

>AT2G28550.1 length:1350
ATGTTGGATC TTAACCTCAA CGCTGATTCT CCCGAGTCGA CTCAGTACGG 
50
TGGTGACTCA TACTTAGATC GGCAGACATC AGACAACTCC GCCGGGAATC 
100
GAGTGGAAGA GTCCGGTACA TCGACGTCGT CAGTTATCAA TGCCGATGGA 
150
GACGAAGACT CTTGCTCTAC TCGAGCTTTC ACTCTCAGTT TCGATATTTT 
200
AAAAGTCGGA AGTAGTAGCG GCGGAGACGA AAGCCCCGCC GCTTCAGCTT 
250
CCGTTACTAA AGAGTTTTTT CCGGTGAGTG GAGACTGTGG ACATCTACGA 
300
GATGTTGAAG GATCATCAAG CTCTAGAAAC TGGATAGATC TTTCTTTTGA 
350
CCGTATTGGT GACGGAGAAA CGAAATTGGT AACTCCGGTT CCGACTCCGG 
400
CTCCGGTTCC GGCTCAGGTT AAAAAGAGTC GGAGAGGACC AAGGTCTAGA 
450
AGTTCACAGT ATAGAGGAGT TACTTTTTAT AGAAGAACTG GTCGATGGGA 
500
GTCACATATT TGGGATTGTG GGAAACAAGT TTATTTAGGT GGTTTCGACA 
550
CTGCTCATGC TGCAGCTAGA GCTTATGATC GAGCTGCTAT TAAATTTAGA 
600
GGTGTTGATG CTGATATCAA CTTTACTCTT GGTGATTATG AGGAAGATAT 
650
GAAACAGGTA CAAAACTTGA GTAAGGAAGA GTTTGTGCAT ATACTGCGTA 
700
GACAGAGCAC GGGGTTTTCG CGGGGGAGTT CGAAGTATCG AGGGGTTACG 
750
TTACACAAAT GTGGTAGATG GGAAGCTAGG ATGGGGCAGT TTCTTGGTAA 
800
AAAGGCTTAT GACAAGGCTG CAATCAACAC TAATGGTAGA GAAGCAGTCA 
850
CGAACTTCGA GATGAGTTCA TACCAAAATG AGATTAACTC TGAGAGCAAT 
900
AACTCTGAGA TTGACCTCAA CTTGGGAATC TCTTTATCGA CCGGTAATGC 
950
GCCAAAGCAA AATGGGAGGC TCTTTCACTT CCCTTCTAAT ACTTATGAAA 
1000
CTCAGCGTGG AGTTAGCTTG AGGATAGATA ACGAATACAT GGGAAAGCCG 
1050
GTGAATACAC CTCTTCCTTA TGGATCCTCG GATCATCGCC TTTACTGGAA 
1100
CGGAGCATGC CCGAGTTATA ATAATCCCGC CGAGGGAAGA GCAACAGAAA 
1150
AGAGAAGTGA AGCTGAAGGG ATGATGAGTA ACTGGGGATG GCAGAGACCG 
1200
GGGCAAACAA GCGCCGTGAG ACCGCAGCCA CCGGGACCAC AACCACCACC 
1250
ATTGTTCTCA GTTGCAGCAG CATCATCAGG ATTCTCACAT TTCCGGCCAC 
1300
AACCTCCCAA TGACAATGCA ACACGTGGTT ACTTTTATCC ACACCCTTAA 
1350

>AT2G28550.1 longest ORF length:449
MLDLNLNADS PESTQYGGDS YLDRQTSDNS AGNRVEESGT STSSVINADG 
50
DEDSCSTRAF TLSFDILKVG SSSGGDESPA ASASVTKEFF PVSGDCGHLR 
100
DVEGSSSSRN WIDLSFDRIG DGETKLVTPV PTPAPVPAQV KKSRRGPRSR 
150
SSQYRGVTFY RRTGRWESHI WDCGKQVYLG GFDTAHAAAR AYDRAAIKFR 
200
GVDADINFTL GDYEEDMKQV QNLSKEEFVH ILRRQSTGFS RGSSKYRGVT 
250
LHKCGRWEAR MGQFLGKKAY DKAAINTNGR EAVTNFEMSS YQNEINSESN 
300
NSEIDLNLGI SLSTGNAPKQ NGRLFHFPSN TYETQRGVSL RIDNEYMGKP 
350
VNTPLPYGSS DHRLYWNGAC PSYNNPAEGR ATEKRSEAEG MMSNWGWQRP 
400
GQTSAVRPQP PGPQPPPLFS VAAASSGFSH FRPQPPNDNA TRGYFYPHP
450