fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G28710 C2H2-type zinc finger family protein (.1)

>AT2G28710.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
NdeI CA|TATG 243
StyI C|C[AT][AT]GG 143


Click here to view TAIR data

>AT2G28710.1 length:471
ATGGAAAGGG GAAGATCAGA TATGGAGATG ATAAACAACA TGGCAAATTG 
50
CTTGATTCTT CTATCAAAGG CCCATCAAAA CGACACCAAA AGCCGTGTTT 
100
TCGCGTGCAA GACATGCAAC AAAGAGTTCC CGTCGTTCCA AGCCTTGGGA 
150
GGTCACCGAG CCAGCCACCG GCGATCCGCA GCGCTTGAAG GCCACGCACC 
200
TCCTTCTCCT AAGAGAGTCA AACCGGTGAA ACACGAGTGT CCCATATGTG 
250
GTGCTGAGTT CGCGGTAGGG CAGGCCTTAG GTGGTCACAT GAGGAAGCAT 
300
AGAGGTGGAT CAGGAGGAGG AGGTGGCCGG AGTTTGGCGC CGGCTACAGC 
350
GCCGGTGACG ATGAAGAAAT CAGGCGGTGG TAATGGAAAA AGAGTTTTGT 
400
GTTTGGACTT GAACTTGACG CCTTTAGAGA ACGAAGATTT GAAGTTGGAG 
450
CTTGGGAGGT TTATTTTCTG A
500

>AT2G28710.1 longest ORF length:156
MERGRSDMEM INNMANCLIL LSKAHQNDTK SRVFACKTCN KEFPSFQALG 
50
GHRASHRRSA ALEGHAPPSP KRVKPVKHEC PICGAEFAVG QALGGHMRKH 
100
RGGSGGGGGR SLAPATAPVT MKKSGGGNGK RVLCLDLNLT PLENEDLKLE 
150
LGRFIF
200