|
|
|
|
|
|
|
|
| Locus | Common name | Short description |
| AT2G29660 | zinc finger (C2H2 type) family protein (.1) |
>AT2G29660.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI
| Name | Recognition sequence | Cut positions |
| BglII | A|GATCT | 353 |
| EcoRI | G|AATTC | 346 |
| EcoRV | GAT|ATC | 207 |
| HindIII | A|AGCTT | 121 |
| StyI | C|C[AT][AT]GG | 1078 |
| XhoI | C|TCGAG | 421 |
Click here to view TAIR data
>AT2G29660.1 length:1122
ATGGCGGCTC GAAAACTAGG GTCGTTGTTA CGTCAATACT TTTTCTCTCT | 50 |
ATGCTTCCTC TTCCTCGGTT GCTTCTTCTT CCCTAAAGAC GCAGACTATA | 100 |
AACAAAAGAG AAGAAAGAAG AAGCTTAGAA GAGTTTCTTC TTCTTCTGGT | 150 |
TCATCTCTAT CCTCTTCTTG GACGTATTTA AAACGAGTTT TCTTATCCAC | 200 |
GACAAGGATA TCCAAATCCC GTAACCAAAC ACATCCTAAC GTTACTTTAA | 250 |
CATCCGCAAG ATCATCTCAA AACTCCCTCG TCACTCTCGT CCAACCCGAT | 300 |
ACCACAAACC AACCCGACCC GGAAACACGT ATTCATCAGC AAACCGAATT | 350 |
CGAGATCTCC TCTTCCGACG AGATTTTCCC TTGTAACTCG TGTGGCGAGA | 400 |
TTTTCCCAAA AATCAATCTC CTCGAGAATC ACATCGCGAT CAAACACGCC | 450 |
GTGTCGGAGC TAATCGCCGG AGAATCAAGC ACGAACATCG TCAAGATCAT | 500 |
ATTCAAATCT GGTTGGCCGG AGCAAGGTAA TTACAAATCT CCGGTGATCA | 550 |
ATCGAATCTT AAAAATCCAC AACAGTTCAA AGATTCTCAC CAGATTCGAA | 600 |
GAGTATCGTG AGTTCGTGAA AGCTAAAGCC GCTCGTAGCA ACGGCGGTGG | 650 |
AAGACGGTGG GACGATGAAC GTTGCGTCGC CGACGGAAAC GAACTTTTAC | 700 |
GATTTTACTG CTCGACGTTT ATGTGTGATT TAGGGCAAAA CGGTAAATCA | 750 |
AATCTCTGTG GTCATCAGTA TTGTAGTATC TGTGGTATCA TCGGATCTGG | 800 |
ATTCTCGCCG AAGCTCGACG GGATCGCGAC GTTGGCGACG GGGTGGAGAG | 850 |
GACACGTGGC GGTTCCGGAG GAGGTTGAAG AAGAGTTTGG GTTTATGAAT | 900 |
GTGAAACGGG CCATGTTGGT TTGTCGGGTT GTAGCGGGTC GGGTCGGGTG | 950 |
TGATTTGATT GATGATGATG ACGTGGATAA GAGTGATGGT GGAGGGTATG | 1000 |
ATTCTCTGGT TGGGCAGAGT GGGAACAAGA GTGGGGCTCT GTTGAGGATC | 1050 |
GACGATGATG AGCTTTTGGT TTTTAATCCA AGGGCTGTGC TTCCTTGTTT | 1100 |
TGTTATTGTG TATACTGTGT AA | 1150 |
>AT2G29660.1 longest ORF length:373
MAARKLGSLL RQYFFSLCFL FLGCFFFPKD ADYKQKRRKK KLRRVSSSSG | 50 |
SSLSSSWTYL KRVFLSTTRI SKSRNQTHPN VTLTSARSSQ NSLVTLVQPD | 100 |
TTNQPDPETR IHQQTEFEIS SSDEIFPCNS CGEIFPKINL LENHIAIKHA | 150 |
VSELIAGESS TNIVKIIFKS GWPEQGNYKS PVINRILKIH NSSKILTRFE | 200 |
EYREFVKAKA ARSNGGGRRW DDERCVADGN ELLRFYCSTF MCDLGQNGKS | 250 |
NLCGHQYCSI CGIIGSGFSP KLDGIATLAT GWRGHVAVPE EVEEEFGFMN | 300 |
VKRAMLVCRV VAGRVGCDLI DDDDVDKSDG GGYDSLVGQS GNKSGALLRI | 350 |
DDDELLVFNP RAVLPCFVIV YTV | 400 |