Locus |
Common name |
Short description |
AT2G30130 |
PCK1, LBD12, ASL5 |
PEACOCK 1, Lateral organ boundaries (LOB) domain family protein (.1) |
>AT2G30130.1 CDS map
>>Show genomic map

Uncut enzymes: AatII, Acc65I, AccIII(BspMII), AciI, AclI, AfeI, AflIII, AgeI, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AseI, AvaI, AvrII, BaeI, BalI, BamHI, BanII, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BglI, BglII, BlpI, BmrI, BpmI, BsaAI, BsaBI, BsaHI, BsaI, BsaJI, BsaXI, BseRI, BsgI, BsiEI, BsiHKAI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BsoBI, Bsp1286I, BspDI, BspEI, BspHI, BspMI, BsrBI, BsrDI, BsrFI, BsrGI, BsrI, BssHII, BssSI, BstAPI, BstBI, BstEII, BstF5I, BstNI, BstXI, BstZ17I, Bsu36I, BtgI, BtrI, Cfr10I, ClaI, DdeI, DraI, DrdI, EaeI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HaeII, HaeIII, HgaI, HhaI, HinP1I, HincII, HpaI, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, MspA1I, N.BstNBI, NaeI, , NarI, NcoI, NdeI, NgoMIV, NheI, NotI, NruI, NsiI, NspI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspGI, PspOMI, PstI, PvuI, PvuII, RsrII, SacI, SacII, SalI, SapI, SbfI, SexAI, SfaNI, SfcI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SphI, SspI, StuI, StyI, SwaI, TliI, Tsp45I, Tth111I, XbaI, XcmI, XhoI, XmaI, XmnI
Name |
Recognition sequence |
Cut positions |
AccI
| GT|[AC][TG]AC |
238 |
AccII(FnuDII)
| CG|CG |
187 |
AflII
| C|TTAAG |
556 |
AluI
| AG|CT |
36, 162, 181, 285, 397 |
ApoI
| Pu|AATTPy |
106 |
AvaII
| G|G[AT]CC |
6 |
BanI
| G|GPyPuCC |
133 |
BfaI
| C|TAG |
299, 380 |
BsaWI
| [AT]|CCGG[AT] |
234 |
BslI
| CCNNNNN|NNGG |
240 |
BspT107I(HgiCI)
| G|G[TC][AG]CC |
133 |
BssKI
| |CCNGG |
9 |
BstUI
| CG|CG |
187 |
BstYI
| Pu|GATCPy |
231 |
BtsI
| GCAGTGNN| |
306 |
Cac8I
| GCN|NGC |
136 |
DpnI
| GA-CH3|TC |
12, 95, 230 |
DpnII
| |GATC |
12, 95, 230 |
DraIII
| CACNNN|GTG |
23 |
Fnu4HI
| GC|NGC |
244, 284, 511 |
HindIII
| A|AGCTT |
37 |
HinfI
| G|ANTC |
320, 564 |
HpaII
| C|CGG |
9, 233 |
Hpy188I
| TCN|GA |
290, 332 |
Hpy99I
| CG[AT]CG| |
45 |
HpyCH4III
| ACN|GT |
356, 482 |
HpyCH4IV
| A|CGT |
141 |
HpyCH4V
| TG|CA |
55, 65, 156, 294, 326, 336, 431, 519, 525, 531, 537, 543 |
MboI
| |GATC |
12, 95, 230 |
MseI
| T|TAA |
555, 577 |
MslI
| CAPyNN|NNPuTG |
21, 334 |
MspI
| C|CGG |
9, 233 |
MwoI
| GCNNNNN|NNGC |
145, 293, 344 |
NciI
| CC|[CG]GG |
9 |
NlaIII
| CATG| |
21, 469 |
NlaIV
| GGN|NCC |
7, 133 |
RsaI
| GT|AC |
371 |
Sau3AI
| |GATC |
12, 95, 230 |
Sau96I
| G|GNCC |
6 |
ScaI
| AGT|ACT |
372 |
ScrFI
| CC|NGG |
9 |
SmlI
| C|TPyPuAG |
311, 556 |
Taqƒ¿I
| T|CGA |
43 |
TfiI
| G|A[AT]TC |
320, 564 |
TseI
| G|C[AT]GC |
244, 284, 511 |
Tsp509I
| |AATT |
105 |
TspRI
| NNCA[CG]TGNN| |
306 |
Click here to view TAIR data
>AT2G30130.1 length:582
ATGGGCGGTC CCGGATCATC ACCATGTGCT TCGTGTAAGC TTCTTCGACG | 50 |
ACGATGTGCA AAAGATTGCA TCTTCGCACC TTATTTTCCT CCTGACGATC | 100 |
CTCACAAATT CGCCATTGTT CATAAGGTCT TTGGTGCCAG CAACGTCAGC | 150 |
AAAATGTTGC AGGAGCTACC AGTTCATCAA AGAGCTGACG CGGTGAATAG | 200 |
TCTGGTTTTT GAAGCAAACG CAAGAGTAAG AGATCCGGTC TACGGCTGCG | 250 |
TAGGAGCAAT CTCCTACTTA CAAAACCAAG TCTCGCAGCT TCAGATGCAA | 300 |
CTAGCAGTGG CTCAAGCCGA GATTCTTTGC ATTCAGATGC AAAATGAGCC | 350 |
AACCTTACAG TCTCATCATC AAGTACTTGA ACTAGACCAA GACCACAAAG | 400 |
CTCTCTTACT AAACAACAAC AACATCAATA ACTGCAACAC CAACAACAAC | 450 |
AATAACAACT TTGGTTATGC CATGTCTTCT GGACAGTTCA ACTCTAACTT | 500 |
TGCCTCACCA AGCAGCATAA TGCAAATGCA GATGCAAATG CAAATGCAAG | 550 |
ACCCTCTTAA GCAAGAATCT CTTTGGACTT AA | 600 |
>AT2G30130.1 longest ORF length:193
MGGPGSSPCA SCKLLRRRCA KDCIFAPYFP PDDPHKFAIV HKVFGASNVS | 50 |
KMLQELPVHQ RADAVNSLVF EANARVRDPV YGCVGAISYL QNQVSQLQMQ | 100 |
LAVAQAEILC IQMQNEPTLQ SHHQVLELDQ DHKALLLNNN NINNCNTNNN | 150 |
NNNFGYAMSS GQFNSNFASP SSIMQMQMQM QMQDPLKQES LWT | 200 |
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