fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G30340 LBD13 LOB domain-containing protein 13 (.1)

>AT2G30340.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
NcoI C|CATGG 677
StyI C|C[AT][AT]GG 613, 677


Click here to view TAIR data

>AT2G30340.1 length:807
ATGTCCCGAG AAAGGGAAGG ATTTGGAGAG TACTACGAGA CCGTCAAGAA 
50
GATAAAGAAA GATCCAGCCT TCGAGACAAC GACGGATCAT GCCGTGATGG 
100
GAATCAGGAG ACATGTGGCG GTGCCTCCGG GGACAACGTT GAACACCGTA 
150
ACACCATGCG CCGCTTGTAA GCTCCTCCGC CGTCGTTGTG CGGAGGAGTG 
200
TCCTTTCTCG CCTTACTTCT CGCCGCATGA ACCTCACAAG TTCGCTGCCG 
250
TTCATAAAGT CTTTGGTGCA AGCAACGTCT CCAAGATGCT TCTGGAAGTG 
300
GGAGAGAGCC AAAGAGGAGA CGCAGCAAAT AGTTTAGTAT ACGAAGCAAA 
350
CCTAAGACTT AGAGATCCAA TCTACGGTTG CATGGGAGCA ATCTCAGCTC 
400
TTCAACACCA CATTCAGTCT CTTCAATCCG AACTCACGAC CGTCCGTACG 
450
GAAATCCTAC GCCACAAATA CCAAGAAGCC ACCACCATCA CTTCTCTCCA 
500
AAACAACTTC AACAGCACTA CAACAACTTC ATCAGTGAGT TGTGATCAGC 
550
ATGCTCTCGC CTCGGCGATT CTCCTCCCAC CACCACCGCC ACCACCTCCT 
600
ACTCCACGAC CACCAAGGTT GTTGTCCTCT CAGCCAGCTC CACCGCCTAC 
650
GCCACCCGTT TCTTTGCCAT CTCCGTCCAT GGTTGTGTCG TCCTCTTCAT 
700
CTTCTAATTC ATCTGCCACC AATTCTATGT ATAATCCTCC TCCATCTTCG 
750
ACGGCTGGAT ATAGCAATTC TCTGTCCAGT GATAATAATG TTCATTACTT 
800
TGATTAA
850

>AT2G30340.1 longest ORF length:268
MSREREGFGE YYETVKKIKK DPAFETTTDH AVMGIRRHVA VPPGTTLNTV 
50
TPCAACKLLR RRCAEECPFS PYFSPHEPHK FAAVHKVFGA SNVSKMLLEV 
100
GESQRGDAAN SLVYEANLRL RDPIYGCMGA ISALQHHIQS LQSELTTVRT 
150
EILRHKYQEA TTITSLQNNF NSTTTTSSVS CDQHALASAI LLPPPPPPPP 
200
TPRPPRLLSS QPAPPPTPPV SLPSPSMVVS SSSSSNSSAT NSMYNPPPSS 
250
TAGYSNSLSS DNNVHYFD
300